G1966865


Basic Information

Item Value
gene id G1966865
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25680403 ~ 25680612 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2248765
tctctagagagttgaaaacagcaggtgtgggacaggtagcacgtccggtgaacagctcagggttccatagccgcaggcagaacagttgaaactggagcagcagcacgaccaggtggactggggacagcaaggagtcatcatgacaggtagtcccgaggcatggtcctaggactcaggtcctccgagagagagaaagagagaattggagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2248765 True 210 lncRNA 0.55 1 25680403 25680612

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 103432 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 350619 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 494536 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 568466 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 888809 24788926 ~ 24791594 (+)
LOC110504216 NA coding downstream 319089 25999701 ~ 26089364 (+)
LOC110505710 spred1 coding downstream 756503 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 847038 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 902247 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 1221165 26901777 ~ 26904037 (+)
G1966742 NA non-coding upstream 1828 25594051 ~ 25678575 (+)
G1966693 NA non-coding upstream 165342 25514833 ~ 25515061 (+)
G1966635 NA non-coding upstream 209710 25470475 ~ 25470693 (+)
G1966618 NA non-coding upstream 220373 25459691 ~ 25460030 (+)
G1966876 NA non-coding downstream 9865 25690477 ~ 25690867 (+)
G1966882 NA non-coding downstream 14436 25695048 ~ 25695269 (+)
G1966888 NA non-coding downstream 17090 25697702 ~ 25697916 (+)
G1966898 NA non-coding downstream 27647 25708259 ~ 25708504 (+)
G1966900 NA non-coding downstream 30532 25711144 ~ 25711348 (+)
G1965396 NA other upstream 1113256 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1318921 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1319418 24360437 ~ 24360985 (+)
G1964499 NA other upstream 1603682 24076521 ~ 24076721 (+)
G1967032 NA other downstream 150964 25831576 ~ 25833321 (+)
G1967965 NA other downstream 974293 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1308227 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2732988 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3793508 29474120 ~ 29478383 (+)

Expression


Co-expression Network