G1966888


Basic Information

Item Value
gene id G1966888
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25697702 ~ 25697916 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2248788
aaggTTGGCAAATAGTTGTAAATGTAGGGATCAAGGAAGAAGTTTTGTTAGGCGCATTTAAGTGCGTATATTATTTCTGCTTTTTGGATTTGATGCGGAATAACTGTTTAATCCTTCCACGGTGAATGTCAGTTTGTCAGGTCTGTGTGCTGTGATTCCATCTTCAACTGGCTTCAAGTCTGTGGGGCTCTTTCAGCATTAGTACATTCAAAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2248788 True 215 lncRNA 0.40 1 25697702 25697916

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 120731 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 367918 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 511835 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 585765 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 906108 24788926 ~ 24791594 (+)
LOC110504216 NA coding downstream 301785 25999701 ~ 26089364 (+)
LOC110505710 spred1 coding downstream 739199 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 829734 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 884943 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 1203861 26901777 ~ 26904037 (+)
G1966882 NA non-coding upstream 2433 25695048 ~ 25695269 (+)
G1966876 NA non-coding upstream 6835 25690477 ~ 25690867 (+)
G1966865 NA non-coding upstream 17090 25680403 ~ 25680612 (+)
G1966742 NA non-coding upstream 19127 25594051 ~ 25678575 (+)
G1966693 NA non-coding upstream 182641 25514833 ~ 25515061 (+)
G1966898 NA non-coding downstream 10343 25708259 ~ 25708504 (+)
G1966900 NA non-coding downstream 13228 25711144 ~ 25711348 (+)
G1966964 NA non-coding downstream 68599 25766515 ~ 25766740 (+)
G1966965 NA non-coding downstream 68943 25766859 ~ 25767256 (+)
G1966971 NA non-coding downstream 73243 25771159 ~ 25771481 (+)
G1965396 NA other upstream 1130555 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1336220 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1336717 24360437 ~ 24360985 (+)
G1964499 NA other upstream 1620981 24076521 ~ 24076721 (+)
G1967032 NA other downstream 133660 25831576 ~ 25833321 (+)
G1967965 NA other downstream 956989 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1290923 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2715684 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3776204 29474120 ~ 29478383 (+)

Expression


Co-expression Network