G1966898


Basic Information

Item Value
gene id G1966898
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25708259 ~ 25708504 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2248798
cagatacacaaacacacgtatgcacacacacaaggCTACATTCTCCAACTTAAAAAAAGTACAGACAGATAAACACTCACACAGCTTTGTATCCTAGTCAGATTTCAAAGGCTATGAGGGCCTTGTTTCTAGTTCCTCGCCAGACTCAAACTACAAAGTTGTAGCTAGTTAAATGGATCCCCATAATGATCAACCATTCTTATCCATCTCAGTCTTTCACTAGTAGTACTCTATTTACCACTATGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2248798 True 246 lncRNA 0.39 1 25708259 25708504

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 131288 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 378475 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 522392 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 596322 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 916665 24788926 ~ 24791594 (+)
LOC110504216 NA coding downstream 291197 25999701 ~ 26089364 (+)
LOC110505710 spred1 coding downstream 728611 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 819146 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 874355 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 1193273 26901777 ~ 26904037 (+)
G1966888 NA non-coding upstream 10343 25697702 ~ 25697916 (+)
G1966882 NA non-coding upstream 12990 25695048 ~ 25695269 (+)
G1966876 NA non-coding upstream 17392 25690477 ~ 25690867 (+)
G1966865 NA non-coding upstream 27647 25680403 ~ 25680612 (+)
G1966742 NA non-coding upstream 29684 25594051 ~ 25678575 (+)
G1966900 NA non-coding downstream 2640 25711144 ~ 25711348 (+)
G1966964 NA non-coding downstream 58011 25766515 ~ 25766740 (+)
G1966965 NA non-coding downstream 58355 25766859 ~ 25767256 (+)
G1966971 NA non-coding downstream 62655 25771159 ~ 25771481 (+)
G1966982 NA non-coding downstream 76602 25785106 ~ 25785331 (+)
G1965396 NA other upstream 1141112 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1346777 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1347274 24360437 ~ 24360985 (+)
G1964499 NA other upstream 1631538 24076521 ~ 24076721 (+)
G1967032 NA other downstream 123072 25831576 ~ 25833321 (+)
G1967965 NA other downstream 946401 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1280335 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2705096 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3765616 29474120 ~ 29478383 (+)

Expression


Co-expression Network