G1966900


Basic Information

Item Value
gene id G1966900
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25711144 ~ 25711348 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2248800
cgTGTGCCATCATGCGCTatcgtgcgctatcgtgcatacatttattttgtcaccccacaccaaacgcgatcaagacacgcaggttaaaatatcaaaacaaactccgaaccaattacattaatttggggacaggtcgaaaagcattaaacatgtatggcaatttagctagttagcttgcactaaCGTTCATTTGTCCTatatagct

Function

NR:

description
PREDICTED: uncharacterized protein LOC106605365

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2248800 True 205 lncRNA 0.41 1 25711144 25711348

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 134173 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 381360 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 525277 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 599207 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 919550 24788926 ~ 24791594 (+)
LOC110504216 NA coding downstream 288353 25999701 ~ 26089364 (+)
LOC110505710 spred1 coding downstream 725767 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 816302 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 871511 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 1190429 26901777 ~ 26904037 (+)
G1966898 NA non-coding upstream 2640 25708259 ~ 25708504 (+)
G1966888 NA non-coding upstream 13228 25697702 ~ 25697916 (+)
G1966882 NA non-coding upstream 15875 25695048 ~ 25695269 (+)
G1966876 NA non-coding upstream 20277 25690477 ~ 25690867 (+)
G1966865 NA non-coding upstream 30532 25680403 ~ 25680612 (+)
G1966964 NA non-coding downstream 55167 25766515 ~ 25766740 (+)
G1966965 NA non-coding downstream 55511 25766859 ~ 25767256 (+)
G1966971 NA non-coding downstream 59811 25771159 ~ 25771481 (+)
G1966982 NA non-coding downstream 73758 25785106 ~ 25785331 (+)
G1967018 NA non-coding downstream 104782 25816130 ~ 25816335 (+)
G1965396 NA other upstream 1143997 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1349662 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1350159 24360437 ~ 24360985 (+)
G1964499 NA other upstream 1634423 24076521 ~ 24076721 (+)
G1967032 NA other downstream 120228 25831576 ~ 25833321 (+)
G1967965 NA other downstream 943557 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1277491 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2702252 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3762772 29474120 ~ 29478383 (+)

Expression


Co-expression Network