G1966982


Basic Information

Item Value
gene id G1966982
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 25785106 ~ 25785331 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2248887
GTTTTCAAagtagtcttgttgttaatcccaccacagtatccaatttcaaataggatttacggggaaagcaccacaaacgattgttaggtcaccaacaactcactaaaatacacagccaattttaccagccaaagagagagagagaaaaagcacaaatagagataaaatgaatcactgacctttgataatcttcatcagatgacactcataggacttcatgttacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2248887 True 226 lncRNA 0.37 1 25785106 25785331

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 208135 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 455322 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 599239 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 673169 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 993512 24788926 ~ 24791594 (+)
LOC110504216 NA coding downstream 214370 25999701 ~ 26089364 (+)
LOC110505710 spred1 coding downstream 651784 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 742319 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 797528 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 1116446 26901777 ~ 26904037 (+)
G1966971 NA non-coding upstream 13625 25771159 ~ 25771481 (+)
G1966965 NA non-coding upstream 17850 25766859 ~ 25767256 (+)
G1966964 NA non-coding upstream 18366 25766515 ~ 25766740 (+)
G1966900 NA non-coding upstream 73758 25711144 ~ 25711348 (+)
G1966898 NA non-coding upstream 76602 25708259 ~ 25708504 (+)
G1967018 NA non-coding downstream 30799 25816130 ~ 25816335 (+)
G1967163 NA non-coding downstream 128105 25913436 ~ 25913667 (+)
G1967171 NA non-coding downstream 134208 25919539 ~ 25919880 (+)
G1967179 NA non-coding downstream 142076 25927407 ~ 25927728 (+)
G1967185 NA non-coding downstream 147623 25932954 ~ 25933153 (+)
G1965396 NA other upstream 1217959 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1423624 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1424121 24360437 ~ 24360985 (+)
G1964499 NA other upstream 1708385 24076521 ~ 24076721 (+)
G1967032 NA other downstream 46245 25831576 ~ 25833321 (+)
G1967965 NA other downstream 869574 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 1203508 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2628269 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3688789 29474120 ~ 29478383 (+)

Expression


Co-expression Network