G1967267


Basic Information

Item Value
gene id G1967267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26022847 ~ 26031727 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249180
atcctggtcctggggtctgaatgaacatacatgaagTAGGACtatattacaacactagtcacatccagcctggtcctggggtctgaatgaacatacatgtagtatgactacattacaacactagtgacatccatcctgatcctggggtctgaatgaacatacatgtagtaggactacattacaacactagtcacatccatcctggtcctggggtctgaatgaacatacatgtagtaggactacattacaacactagtcacatccatcctggtcctgcagtctgaatgaacatacatgtagtaggactacattacaacactagtcacatccatcctggtcctgcagtctgaatgaacatacatgtagtagaactacattacaacactagtcacatccatcctggtcctggggtctgaatgaacatacatgtattaggactacattacaacactagtcacatccatcctggtcctggggtctgaatgaacatacatgaagTATGACtatattac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249180 True 512 lncRNA 0.42 2 26022847 26031727

Neighbor

gene id symbol gene type direction distance location
LOC110505705 vdac2 coding upstream 445876 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 693063 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 836980 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 910910 25044862 ~ 25111937 (+)
LOC110505697 ypel5 coding upstream 1231253 24788926 ~ 24791594 (+)
LOC110505710 spred1 coding downstream 405388 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 495923 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 551132 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 870050 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 920413 26952140 ~ 26953607 (+)
G1967250 NA non-coding upstream 37281 25985180 ~ 25985566 (+)
G1967245 NA non-coding upstream 42712 25979922 ~ 25980135 (+)
G1967188 NA non-coding upstream 87819 25934823 ~ 25935028 (+)
G1967185 NA non-coding upstream 89694 25932954 ~ 25933153 (+)
G1967179 NA non-coding upstream 95119 25927407 ~ 25927728 (+)
G1967270 NA non-coding downstream 15161 26046888 ~ 26047301 (+)
G1967318 NA non-coding downstream 46728 26078455 ~ 26078792 (+)
G1967332 NA non-coding downstream 65512 26097239 ~ 26097440 (+)
G1967342 NA non-coding downstream 72776 26104503 ~ 26104711 (+)
G1967393 NA non-coding downstream 177831 26209558 ~ 26210003 (+)
G1967032 NA other upstream 189526 25831576 ~ 25833321 (+)
G1965396 NA other upstream 1455700 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1661365 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1661862 24360437 ~ 24360985 (+)
G1967965 NA other downstream 623178 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 957112 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2381873 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3442393 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 4291786 30092455 ~ 30330735 (+)

Expression


Co-expression Network