G1967393


Basic Information

Item Value
gene id G1967393
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26209558 ~ 26210003 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249328
ttactatctctctctattagtccttctgtctctctctctctattactgtctctctctctctattactgtctctctctctctctattactgtatctctctctctattactgtctctctctattactgtatctctctctctattactatctctctcttttagtccttcggtatctctctctctattactgtctctctctctctattactgtctctctctctctctattactgtatctctctctctattactgtctctctctatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249328 True 262 lncRNA 0.38 2 26209558 26210003

Neighbor

gene id symbol gene type direction distance location
LOC110504216 NA coding upstream 120194 25999701 ~ 26089364 (+)
LOC110505705 vdac2 coding upstream 632587 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 879774 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 1023691 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 1097621 25044862 ~ 25111937 (+)
LOC110505710 spred1 coding downstream 227112 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 317647 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 372856 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 691774 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 742137 26952140 ~ 26953607 (+)
G1967342 NA non-coding upstream 104847 26104503 ~ 26104711 (+)
G1967332 NA non-coding upstream 112118 26097239 ~ 26097440 (+)
G1967318 NA non-coding upstream 130766 26078455 ~ 26078792 (+)
G1967270 NA non-coding upstream 162257 26046888 ~ 26047301 (+)
G1967267 NA non-coding upstream 177831 26022847 ~ 26031727 (+)
G1967411 NA non-coding downstream 25526 26235529 ~ 26235744 (+)
G1967412 NA non-coding downstream 26293 26236296 ~ 26236525 (+)
G1967489 NA non-coding downstream 44858 26254861 ~ 26255070 (+)
G1967492 NA non-coding downstream 46507 26256510 ~ 26256719 (+)
G1967496 NA non-coding downstream 48579 26258582 ~ 26258783 (+)
G1967032 NA other upstream 376237 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 1417964 24788926 ~ 24791594 (+)
G1965396 NA other upstream 1642411 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1848076 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1848573 24360437 ~ 24360985 (+)
G1967965 NA other downstream 444902 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 778836 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2203597 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3264117 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 4113510 30092455 ~ 30330735 (+)

Expression


Co-expression Network