G1967489


Basic Information

Item Value
gene id G1967489
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26254861 ~ 26255070 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249442
CTTCAGGATCACTGGCCTCGCTATGGTTTTGCAATTACCTTTAACCTTTAGTGAGACTGTGTGGTATAAAGGCTTAAGCAGATGTTCTTGGACTGACCTGATAGTAGTAGACAGTCAATGAATAATCATGTTGTTCTACAATTTCATTCACTTTCACACGGACTCTTTCACTCTATAGCAATGGTGGCTTTACAAACAAGACAATATACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249442 True 210 lncRNA 0.39 1 26254861 26255070

Neighbor

gene id symbol gene type direction distance location
LOC110504216 NA coding upstream 165497 25999701 ~ 26089364 (+)
LOC110505705 vdac2 coding upstream 677890 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 925077 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 1068994 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 1142924 25044862 ~ 25111937 (+)
LOC110505710 spred1 coding downstream 182045 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 272580 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 327789 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 646707 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 697070 26952140 ~ 26953607 (+)
G1967412 NA non-coding upstream 18336 26236296 ~ 26236525 (+)
G1967411 NA non-coding upstream 19117 26235529 ~ 26235744 (+)
G1967393 NA non-coding upstream 44858 26209558 ~ 26210003 (+)
G1967342 NA non-coding upstream 150150 26104503 ~ 26104711 (+)
G1967332 NA non-coding upstream 157421 26097239 ~ 26097440 (+)
G1967492 NA non-coding downstream 1440 26256510 ~ 26256719 (+)
G1967496 NA non-coding downstream 3512 26258582 ~ 26258783 (+)
G1967524 NA non-coding downstream 30505 26285575 ~ 26285790 (+)
G1967533 NA non-coding downstream 36629 26291699 ~ 26292455 (+)
G1967561 NA non-coding downstream 59141 26314211 ~ 26314437 (+)
G1967032 NA other upstream 421540 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 1463267 24788926 ~ 24791594 (+)
G1965396 NA other upstream 1687714 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1893379 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1893876 24360437 ~ 24360985 (+)
G1967965 NA other downstream 399835 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 733769 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2158530 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3219050 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 4068443 30092455 ~ 30330735 (+)

Expression


Co-expression Network