G1967533


Basic Information

Item Value
gene id G1967533
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26291699 ~ 26292455 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249486
GATTTTACTTTGGTACTTAGGTTAACACTATGAATGGTAGTTAGGTTAACTCTATGAATGGCAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACTCTATGAATGGCAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACTCTATGAATGGACGTTTGGTTAACACTGTGAATGGTAGTTAGGTTAACTCTATGAATGGACGTTTGGTTAACACTGTGAATGGTAGTTAGGTTAACACTATGAATGGTAGTTAGGTTAACACTATGAATGGTAATT

Function

NR:

description
extensin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249486 True 354 lncRNA 0.34 2 26291699 26292455

Neighbor

gene id symbol gene type direction distance location
LOC110504216 NA coding upstream 202335 25999701 ~ 26089364 (+)
LOC110505705 vdac2 coding upstream 714728 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 961915 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 1105832 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 1179762 25044862 ~ 25111937 (+)
LOC110505710 spred1 coding downstream 144660 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 235195 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 290404 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 609322 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 659685 26952140 ~ 26953607 (+)
G1967524 NA non-coding upstream 5909 26285575 ~ 26285790 (+)
G1967496 NA non-coding upstream 32916 26258582 ~ 26258783 (+)
G1967492 NA non-coding upstream 34980 26256510 ~ 26256719 (+)
G1967489 NA non-coding upstream 36629 26254861 ~ 26255070 (+)
G1967412 NA non-coding upstream 55174 26236296 ~ 26236525 (+)
G1967561 NA non-coding downstream 21756 26314211 ~ 26314437 (+)
G1967571 NA non-coding downstream 26378 26318833 ~ 26319066 (+)
G1967585 NA non-coding downstream 38005 26330460 ~ 26331231 (+)
G1967609 NA non-coding downstream 53757 26346212 ~ 26346468 (+)
G1967628 NA non-coding downstream 69535 26361990 ~ 26362194 (+)
G1967032 NA other upstream 458378 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 1500105 24788926 ~ 24791594 (+)
G1965396 NA other upstream 1724552 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1930217 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1930714 24360437 ~ 24360985 (+)
G1967965 NA other downstream 362450 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 696384 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2121145 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3181665 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 4031058 30092455 ~ 30330735 (+)

Expression


Co-expression Network