Gene
RNA
| Item | Value |
|---|---|
| gene id | G1967585 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 26330460 ~ 26331231 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2249541 | True | 772 | lncRNA | 0.44 | 1 | 26330460 | 26331231 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504216 | NA | coding | upstream | 241096 | 25999701 ~ 26089364 (+) |
| LOC110505705 | vdac2 | coding | upstream | 753489 | 25575962 ~ 25576971 (+) |
| LOC110505701 | LOC106611118 | coding | upstream | 1000676 | 25221998 ~ 25329784 (+) |
| LOC110504215 | LOC106611119 | coding | upstream | 1144593 | 25118159 ~ 25185867 (+) |
| LOC110504214 | LOC106601609 | coding | upstream | 1218523 | 25044862 ~ 25111937 (+) |
| LOC110505710 | spred1 | coding | downstream | 105884 | 26437115 ~ 26520383 (+) |
| LOC110505712 | LOC106611156 | coding | downstream | 196419 | 26527650 ~ 26534059 (+) |
| LOC110504217 | LOC106601399 | coding | downstream | 251628 | 26582859 ~ 26623165 (+) |
| LOC118944312 | NA | coding | downstream | 570546 | 26901777 ~ 26904037 (+) |
| LOC110505720 | LOC106611151 | coding | downstream | 620909 | 26952140 ~ 26953607 (+) |
| G1967571 | NA | non-coding | upstream | 11394 | 26318833 ~ 26319066 (+) |
| G1967561 | NA | non-coding | upstream | 16023 | 26314211 ~ 26314437 (+) |
| G1967533 | NA | non-coding | upstream | 38005 | 26291699 ~ 26292455 (+) |
| G1967524 | NA | non-coding | upstream | 44670 | 26285575 ~ 26285790 (+) |
| G1967496 | NA | non-coding | upstream | 71677 | 26258582 ~ 26258783 (+) |
| G1967609 | NA | non-coding | downstream | 14981 | 26346212 ~ 26346468 (+) |
| G1967628 | NA | non-coding | downstream | 30759 | 26361990 ~ 26362194 (+) |
| G1967633 | NA | non-coding | downstream | 32963 | 26364194 ~ 26364439 (+) |
| G1967636 | NA | non-coding | downstream | 34841 | 26366072 ~ 26366360 (+) |
| G1967641 | NA | non-coding | downstream | 38570 | 26369801 ~ 26370066 (+) |
| G1967032 | NA | other | upstream | 497139 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 1538866 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 1763313 | 24565731 ~ 24567147 (+) |
| G1965263 | NA | other | upstream | 1968978 | 24361088 ~ 24361482 (+) |
| G1965262 | NA | other | upstream | 1969475 | 24360437 ~ 24360985 (+) |
| G1967965 | NA | other | downstream | 323674 | 26654905 ~ 26655336 (+) |
| LOC110505721 | ccdc88c | other | downstream | 657608 | 26988390 ~ 27099710 (+) |
| G1970001 | NA | other | downstream | 2082369 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 3142889 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 3992282 | 30092455 ~ 30330735 (+) |
