G1967609


Basic Information

Item Value
gene id G1967609
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26346212 ~ 26346468 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249565
ctctggggctgatgaaAATCTTGTGGATGCCACGATAGCTTCAGAGCTTGGTATTcccactcagcctctctctgtgcccaTGGATGTTAGGGCACTGGACGTCCGCTCTATAGGGGAAGTCACACATAGTACTGTGCCCGTTCAATTACGGGTTTCTGGTTAACACAGTGAGACCAGCAACACAGCCTTCCCCAAGTCATCTTTCTCAGGATGTTAGCAGGATTGTGAATGTCTCAGCTACTCCCACTGAATAACAT

Function

NR:

description
cathepsin L1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249565 True 257 lncRNA 0.49 1 26346212 26346468

Neighbor

gene id symbol gene type direction distance location
LOC110504216 NA coding upstream 256848 25999701 ~ 26089364 (+)
LOC110505705 vdac2 coding upstream 769241 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 1016428 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 1160345 25118159 ~ 25185867 (+)
LOC110504214 LOC106601609 coding upstream 1234275 25044862 ~ 25111937 (+)
LOC110505710 spred1 coding downstream 90647 26437115 ~ 26520383 (+)
LOC110505712 LOC106611156 coding downstream 181182 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 236391 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 555309 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 605672 26952140 ~ 26953607 (+)
G1967585 NA non-coding upstream 14981 26330460 ~ 26331231 (+)
G1967571 NA non-coding upstream 27146 26318833 ~ 26319066 (+)
G1967561 NA non-coding upstream 31775 26314211 ~ 26314437 (+)
G1967533 NA non-coding upstream 53757 26291699 ~ 26292455 (+)
G1967524 NA non-coding upstream 60422 26285575 ~ 26285790 (+)
G1967628 NA non-coding downstream 15522 26361990 ~ 26362194 (+)
G1967633 NA non-coding downstream 17726 26364194 ~ 26364439 (+)
G1967636 NA non-coding downstream 19604 26366072 ~ 26366360 (+)
G1967641 NA non-coding downstream 23333 26369801 ~ 26370066 (+)
G1967676 NA non-coding downstream 76308 26422776 ~ 26423068 (+)
G1967032 NA other upstream 512891 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 1554618 24788926 ~ 24791594 (+)
G1965396 NA other upstream 1779065 24565731 ~ 24567147 (+)
G1965263 NA other upstream 1984730 24361088 ~ 24361482 (+)
G1965262 NA other upstream 1985227 24360437 ~ 24360985 (+)
G1967965 NA other downstream 308437 26654905 ~ 26655336 (+)
LOC110505721 ccdc88c other downstream 642371 26988390 ~ 27099710 (+)
G1970001 NA other downstream 2067132 28413600 ~ 28413919 (+)
G1971104 NA other downstream 3127652 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 3977045 30092455 ~ 30330735 (+)

Expression


Co-expression Network