Gene
RNA
| Item | Value |
|---|---|
| gene id | G1967708 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 26510688 ~ 26511808 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2249670 | True | 507 | lncRNA | 0.58 | 2 | 26510688 | 26511808 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504216 | NA | coding | upstream | 421324 | 25999701 ~ 26089364 (+) |
| LOC110505705 | vdac2 | coding | upstream | 933717 | 25575962 ~ 25576971 (+) |
| LOC110505701 | LOC106611118 | coding | upstream | 1180904 | 25221998 ~ 25329784 (+) |
| LOC110504215 | LOC106611119 | coding | upstream | 1324821 | 25118159 ~ 25185867 (+) |
| LOC110504214 | LOC106601609 | coding | upstream | 1398751 | 25044862 ~ 25111937 (+) |
| LOC110505712 | LOC106611156 | coding | downstream | 15842 | 26527650 ~ 26534059 (+) |
| LOC110504217 | LOC106601399 | coding | downstream | 71051 | 26582859 ~ 26623165 (+) |
| LOC118944312 | NA | coding | downstream | 389969 | 26901777 ~ 26904037 (+) |
| LOC110505720 | LOC106611151 | coding | downstream | 440332 | 26952140 ~ 26953607 (+) |
| LOC110505721 | ccdc88c | coding | downstream | 476582 | 26988390 ~ 27099710 (+) |
| G1967676 | NA | non-coding | upstream | 87620 | 26422776 ~ 26423068 (+) |
| G1967641 | NA | non-coding | upstream | 140622 | 26369801 ~ 26370066 (+) |
| G1967636 | NA | non-coding | upstream | 144328 | 26366072 ~ 26366360 (+) |
| G1967633 | NA | non-coding | upstream | 146249 | 26364194 ~ 26364439 (+) |
| G1967628 | NA | non-coding | upstream | 148494 | 26361990 ~ 26362194 (+) |
| G1967713 | NA | non-coding | downstream | 12931 | 26524739 ~ 26525371 (+) |
| G1967714 | LOC106613263 | non-coding | downstream | 13625 | 26525433 ~ 26525784 (+) |
| G1967831 | NA | non-coding | downstream | 27343 | 26539151 ~ 26539270 (+) |
| G1967878 | NA | non-coding | downstream | 106177 | 26617985 ~ 26618186 (+) |
| G1967032 | NA | other | upstream | 677367 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 1719094 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 1943541 | 24565731 ~ 24567147 (+) |
| G1965263 | NA | other | upstream | 2149206 | 24361088 ~ 24361482 (+) |
| G1965262 | NA | other | upstream | 2149703 | 24360437 ~ 24360985 (+) |
| G1967965 | NA | other | downstream | 143097 | 26654905 ~ 26655336 (+) |
| G1970001 | NA | other | downstream | 1901792 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 2962312 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 3811705 | 30092455 ~ 30330735 (+) |
