G1967713


Basic Information

Item Value
gene id G1967713
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26524739 ~ 26525371 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249675
aaatacttatgtcatgcaataaaatgcaaattaattacttaaaaatcgtacaatgtgattttctggatttctgttTTAggttctgtctctcacagttgaagtgtacctatgattaaaaattacagacctctacatgctttgtaagtaggaaacactgctgattttagcaggttatcaaatacttgttcttccactgtgtatatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaactccaagtcaatcacacttctgtgaaatcaaactgtccacttaggaagcaacactgattgacaaatttcacatgctgttgtgcaaatggaatagacaacaggtggaaattataggcaattagcaagacacccccaataaaggagtggttctgcaggtggggaccacagaccacttctcagttcctatgcttcctggctgatgttttggtcacttttgaatgctggtggtgctttcactctagtggtagcatgagacggagtctacaacccacacaagtgactccggtagtgcagctcatccaggatgggacatcaattgcgagctgtggcaagaaggtttgctgtgtctgtcagcgtagtgtctagagtatggaggtgctacca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249675 True 633 lncRNA 0.41 1 26524739 26525371

Neighbor

gene id symbol gene type direction distance location
LOC110505710 spred1 coding upstream 4356 26437115 ~ 26520383 (+)
LOC110504216 NA coding upstream 435375 25999701 ~ 26089364 (+)
LOC110505705 vdac2 coding upstream 947768 25575962 ~ 25576971 (+)
LOC110505701 LOC106611118 coding upstream 1194955 25221998 ~ 25329784 (+)
LOC110504215 LOC106611119 coding upstream 1338872 25118159 ~ 25185867 (+)
LOC110505712 LOC106611156 coding downstream 2279 26527650 ~ 26534059 (+)
LOC110504217 LOC106601399 coding downstream 57488 26582859 ~ 26623165 (+)
LOC118944312 NA coding downstream 376406 26901777 ~ 26904037 (+)
LOC110505720 LOC106611151 coding downstream 426769 26952140 ~ 26953607 (+)
LOC110505721 ccdc88c coding downstream 463019 26988390 ~ 27099710 (+)
G1967708 NA non-coding upstream 12931 26510688 ~ 26511808 (+)
G1967676 NA non-coding upstream 101671 26422776 ~ 26423068 (+)
G1967641 NA non-coding upstream 154673 26369801 ~ 26370066 (+)
G1967636 NA non-coding upstream 158379 26366072 ~ 26366360 (+)
G1967633 NA non-coding upstream 160300 26364194 ~ 26364439 (+)
G1967714 LOC106613263 non-coding downstream 62 26525433 ~ 26525784 (+)
G1967831 NA non-coding downstream 13780 26539151 ~ 26539270 (+)
G1967878 NA non-coding downstream 92614 26617985 ~ 26618186 (+)
G1967963 NA non-coding downstream 127427 26652798 ~ 26653149 (+)
G1967032 NA other upstream 691418 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 1733145 24788926 ~ 24791594 (+)
G1965396 NA other upstream 1957592 24565731 ~ 24567147 (+)
G1965263 NA other upstream 2163257 24361088 ~ 24361482 (+)
G1965262 NA other upstream 2163754 24360437 ~ 24360985 (+)
G1967965 NA other downstream 129534 26654905 ~ 26655336 (+)
G1970001 NA other downstream 1888229 28413600 ~ 28413919 (+)
G1971104 NA other downstream 2948749 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 3798142 30092455 ~ 30330735 (+)

Expression


Co-expression Network