G1967882


Basic Information

Item Value
gene id G1967882
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 26535364 ~ 26538708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2249876
TTTACTTTACTCATTTTCCTTGCTACCCAAAAGTACTTACATTTCGAATTCTTAGCAGAACAGGAACATGGTCCATTcaggcacttatcaagagaacatccctggttatcccgactgcctctgatctggcagactcactaaacacacatgctttgtttgtaaatgatggaGTGTTGGCATGTGCACCTGgttatccaggtctgtgcccaaacaattcgagcttctacttttaaaaatcgacctttccagaaacaagtctctcaccgttgccgcttgttatacaccccccagctgtgccctggacaccatatataAATTTATCGCACCCcatcactgtaaagtccatggagaataagaacacctcccagctgcccactgaagACAGGAAACACtttcaccaccgataaatccactataattgagaatttcaataagcatttttctatggctggccatgctttccacctggctacccctaccccggtcaacagcactgcacccccccactagaggtcgactgattatgatttttcaacgccgataccgattatacaaaaaaaaaaatatttgtaataatgacaattacaacaatactgaatgaacacttatttgaacttaatataatacatcaataaaatcaatttagcctcaaataatgaaacatgttcaatttggtttaaataatgcaaaaacaaagtgttggagaagaaagtaaaagtgcaatatatgctatgtaagaaagctaacgtttcagttccttgctcagaacatgagaacatatgaaagctggtggttccttttaacatgagtcttcaatattcccaggtaagaagttttaggttgtagttattattagatgttcttataggcactttagtattgccagtgtaacagtatagcttccgtccctctcctcgctcctccctgggctcaaaccagcaacacaacgacaacagccatcatcgaagcagcgttacccatgcagggcaagggaaacaaccacaggcTTAGCGAAACGCTATTAGCGTTCGCTAACTAGcaagccatttcacttcggttacaccagcctcatctcgggagttgataggcttgaagtcataaacagcgcaatgcttgacgcacaacaaagagctgctggcaaaacgcacgaaagtgttgtttgaatgaatgtttacactcctgcttctgcctaccaccgctcagtcagatacttgtatgctcagtcagatatgcaacgcaggacacgctagataatatctagtaatatcatcaaccatgtgtggttaactagtgattatgattgattgtttttttatgagataagtttaatgctagctagcaacttaccttggcttactgcattcgcgtaacaggcaggcaggctccttgtggagtgcaacgagagagaggcaggtctttattgcgttggactacttaactgtaaggttgcaagattggatcccccgagctgacaaggtgaaaatgtgtcgttctgcccctgaacgaggcagttaacccaccgttcctaggccgtcattgaaaataagaatgcgttcttaactgacctgcctagttaaataaaggtatacatttttttttttaaataccgatttccgattatgaaaacttgaaatcggccattccgattaatcggtcgacctctactccccacagcaactcgcccaagcctttcccatttctccttctcccaaatccagtcagctgatgttctgaaagagctgcaaaatctggacccctacaaatcagccgggctagacaatttggaccctttctaaaattatctgccgaaattgttgccacccctatcactagcctgttcaacctctctttcgtgccgtctgagattcccaaagattggaaagcagctgcgctaatccccctcttcaaagggggggacactcgacccaaactgctacagacctatatctatcctaccctgcctttctaaggtcttcgaaagccaagtcaacgaacagattaccgaccatttcgaatcccaccacaccttctccgctatgcaatctggtttcagagctggtcatgggtgcacctcagccacgcgcaaggtcctaaattatatcttaaccgccatcgataagaaacaatactgtgcagccgtattcattgacctggccaaggctttcgactctgtcaaacaccacatcctcatcggcagactcgacagccttggtttctcatgcTCTTCTACCaaattgctgcccgcaccctcccgcctgactaccatcactactctggatggttctgacttagaatatgtagacagctacaaacacctaggtgtctggttagactgtaaacgttccttccagactcacattaagcatcttcaatccagaattacatctagaatcggtttcctattttgcaacaaagcctccttcactcaccaaacatgccctcgtaaaactgactatcctaccgattcttgactttggcgatgtaatttacaaaatagcctccaacactctacttagcaaacttgatgcagtctatcacagtgccatctgttttgtcaccaaagccccatatactacccaccactgcgacctgtatgctctcgttggctggccctcactacatatgtcgccaaacccactggctccaggtcatctataagtctttgtagGGAAAGCCACACCTTCTCTCAGCTCACtcgtcaccatagcaacactcatccgtagcacgcactccagcaggtatatttcactggtcattcccaaagccaacGCTTCCtttggccgcttttccttccagttctctgctaccaatgactgaaacgaattgcaaaaatcactgaagggagtcttatctccctctctaactttaagcatcagctgtcagagcagctttccaatcactgtacctgtacaaagccaatctgtaaatagcacacccaactacctcatccgcatattacttaccctcttgcaccccaacatctctacttgcacatcatctgcatatctatcactccagtgttaatgctaaactgtaattattttgcctccatggcctatttattgccttacctccctactcttctacatttgcacacactgtacatagatttttctattgtgttattgactgaacgtttatttatgtgtaactctgtgttgttttgtcgcactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttctcaactggcctacctggttaaataaaaggtgaaataaaaaaaagaaaatggtgccacCTGGTTAGcttaataaggaatttgaaatttgatacttaagtatattttaacaattacatttaaatcaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2249876 True 3345 TUCP 0.43 1 26535364 26538708

Neighbor

gene id symbol gene type direction distance location
LOC110505709 meis2 coding downstream 300695 26106291 ~ 26234669 (-)
LOC118944327 NA coding downstream 617858 25905050 ~ 25917506 (-)
LOC110504331 NA coding downstream 660496 25873334 ~ 25874868 (-)
LOC110505708 LOC106611111 coding downstream 877975 25652474 ~ 25657389 (-)
LOC110505704 NA coding downstream 914503 25614894 ~ 25620861 (-)
LOC110505714 LOC106611157 coding upstream 3267 26541975 ~ 26561933 (-)
spata7 LOC106611158 coding upstream 23424 26562132 ~ 26570450 (-)
LOC110504332 LOC106589664 coding upstream 97697 26636405 ~ 26666349 (-)
bdkrb1 kinrec coding upstream 134463 26673171 ~ 26675278 (-)
LOC110505715 LOC106611159 coding upstream 148341 26687049 ~ 26689949 (-)
G1967820 NA non-coding downstream 11941 26522952 ~ 26523423 (-)
G1967798 LOC106611155 non-coding downstream 13805 26517067 ~ 26521559 (-)
G1967751 NA non-coding downstream 110327 26424758 ~ 26425037 (-)
G1967632 NA non-coding downstream 171568 26363596 ~ 26363796 (-)
G1967622 NA non-coding downstream 178391 26356770 ~ 26356973 (-)
G1967883 NA non-coding upstream 1077 26539785 ~ 26540551 (-)
G1967900 NA non-coding upstream 46236 26584944 ~ 26585254 (-)
G1967902 NA non-coding upstream 48057 26586765 ~ 26587023 (-)
G1967903 NA non-coding upstream 50119 26588827 ~ 26598534 (-)
G1967915 NA non-coding upstream 66519 26605227 ~ 26610230 (-)
G1964728 NA other downstream 3106720 23425563 ~ 23428841 (-)
G1964592 LOC106569888 other downstream 3312861 23221973 ~ 23222503 (-)
G1964564 NA other downstream 3367251 23165032 ~ 23168113 (-)
G1963846 NA other downstream 3489660 23036891 ~ 23045704 (-)
G1962803 LOC106610988 other downstream 4438868 22095519 ~ 22096496 (-)
LOC110505716 LOC106024658 other upstream 177976 26716542 ~ 26765410 (-)
G1969699 LOC100380709 other upstream 1561213 28099921 ~ 28101436 (-)
G1969724 NA other upstream 1604730 28143438 ~ 28143762 (-)
G1970606 NA other upstream 2319232 28857940 ~ 28861987 (-)
G1971357 LOC106611199 other upstream 2984052 29522760 ~ 29525046 (-)

Expression


Co-expression Network