G1969073


Basic Information

Item Value
gene id G1969073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 27548065 ~ 27555156 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2251181
tttattagagaggggtaaagaaagcttttgttcgggcgccaggcaggtattaaccatgccgaaaggaaaagagtagaatagagagaaccactaccagacccacacacatcagcagaagagactgcctagagtgtagcctgtttaccagatagccagtggagagaaaagagaatacacaccatataaaacccacatcacagcacaggggtaacccaaacaagaatacctcatacaataatactaatactaataatggcagagcaattcaacagcaacttcatacaagaacgaacccagtcatcaacataggatttgcaataatctgtattattttctagtagatgagtgcagagggtatgaatgtggggggtgttcatcgacacaacaaaggccttaaaaatgtccagtcttctcggccacatgtcattagtacatctcaatacagttcacataacaatacacaattggcaagcaacctcccttttaactaaaatgtccaaatacttcaggcagggcaataatagtccagctctaatgcacttcaatgggaagtgcattggaaaaatagagagtctgtttcagggtaaagcactggaacgatagagggaagagaaaaagagaaagagaacaagagagatcttagctgtggtcttcaggcgtgcaggtgtactgtctgactgtccgatggtttgttggtttgtatgttaaagcttcgcaacaatgttgctactaatccatgcgatccataacgggcgtggTTCCAAACtaaaacaaccacgacctagagcgattacaccgatgattgagttaaatactctataaactacacacgctgaacacaaacaaaacttctgcagcacagcacacac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2251181 True 869 lncRNA 0.42 2 27548065 27555156

Neighbor

gene id symbol gene type direction distance location
LOC110505725 LOC106611167 coding downstream 176451 27198791 ~ 27371614 (-)
LOC110505724 LOC106611166 coding downstream 381032 27118113 ~ 27167033 (-)
dglucy cssa09h14orf159 coding downstream 430858 27106002 ~ 27117207 (-)
LOC110505719 LOC106611163 coding downstream 571223 26953574 ~ 26976842 (-)
LOC110504334 LOC106611214 coding downstream 612330 26933403 ~ 26935735 (-)
nrde2 nrde2 coding upstream 121414 27676570 ~ 27692575 (-)
LOC110505731 LOC106601235 coding upstream 176993 27732149 ~ 27854460 (-)
brms1la LOC106611172 coding upstream 299463 27854619 ~ 27858599 (-)
LOC110505734 LOC106611217 coding upstream 430394 27985550 ~ 27988951 (-)
LOC110505736 LOC106611176 coding upstream 456705 28011861 ~ 28014313 (-)
G1969031 NA non-coding downstream 14879 27532932 ~ 27533186 (-)
G1969026 NA non-coding downstream 19760 27528085 ~ 27528305 (-)
G1969014 NA non-coding downstream 33429 27514409 ~ 27514636 (-)
G1969010 NA non-coding downstream 38580 27509256 ~ 27509485 (-)
G1968990 NA non-coding downstream 51707 27496156 ~ 27496358 (-)
G1969120 NA non-coding upstream 52939 27608095 ~ 27610767 (-)
G1969458 LOC108228616 non-coding upstream 86254 27641410 ~ 27708762 (-)
G1969491 psmc1b non-coding upstream 113880 27669036 ~ 27670024 (-)
G1969461 NA non-coding upstream 147652 27702808 ~ 27713017 (-)
G1969536 NA non-coding upstream 186900 27742056 ~ 27745143 (-)
LOC110505716 LOC106024658 other downstream 782694 26716542 ~ 26765410 (-)
G1967882 NA other downstream 1009357 26535364 ~ 26538708 (-)
G1964728 NA other downstream 4119421 23425563 ~ 23428841 (-)
G1964592 LOC106569888 other downstream 4325562 23221973 ~ 23222503 (-)
G1964564 NA other downstream 4379952 23165032 ~ 23168113 (-)
G1969699 LOC100380709 other upstream 544765 28099921 ~ 28101436 (-)
G1969724 NA other upstream 588282 28143438 ~ 28143762 (-)
G1970606 NA other upstream 1302784 28857940 ~ 28861987 (-)
G1971357 LOC106611199 other upstream 1967604 29522760 ~ 29525046 (-)
G1972454 NA other upstream 2427128 29982284 ~ 29982900 (-)

Expression


Co-expression Network