G1969206


Basic Information

Item Value
gene id G1969206
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 27742948 ~ 27743489 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2251332
ctccagtacccccagcagtacacaaaccctggtcctccagtaccccaacagtacaccaaccctggtcctccagtacccccaacagcccaaccctggtcctccagtaccctcaacagtacacaaaccctggtccttcagtaccccaacagtacacaaaccctggtcctccagtacccccaacagtacataaaccctggtcctccagtaccccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2251332 True 212 lncRNA 0.57 2 27742948 27743489

Neighbor

gene id symbol gene type direction distance location
LOC118944371 NA coding upstream 21847 27715016 ~ 27721101 (+)
calm1a LOC102293206 coding upstream 34186 27694848 ~ 27708762 (+)
LOC110505726 psmc1 coding upstream 72534 27664997 ~ 27670414 (+)
LOC110505722 LOC106611215 coding upstream 641398 27099673 ~ 27101550 (+)
LOC110505721 ccdc88c coding upstream 643238 26988390 ~ 27099710 (+)
LOC110505733 LOC106611173 coding downstream 116527 27860016 ~ 27985110 (+)
nfkbiab LOC106611175 coding downstream 262961 28006450 ~ 28009481 (+)
ppp2r3c LOC106611177 coding downstream 298112 28041601 ~ 28051126 (+)
LOC110505741 LOC106611180 coding downstream 314703 28058192 ~ 28065667 (+)
gemin2 LOC106611181 coding downstream 351016 28094505 ~ 28099259 (+)
G1969177 NA non-coding upstream 51757 27690629 ~ 27691191 (+)
G1969131 NA non-coding upstream 123847 27618853 ~ 27619101 (+)
G1969130 NA non-coding upstream 125071 27617645 ~ 27617877 (+)
G1969044 NA non-coding upstream 187915 27547992 ~ 27555033 (+)
G1969223 NA non-coding downstream 29890 27773379 ~ 27773755 (+)
G1969276 NA non-coding downstream 112793 27856282 ~ 27856719 (+)
G1969356 LOC106611176 non-coding downstream 268372 28011861 ~ 28014274 (+)
G1969369 NA non-coding downstream 293539 28037028 ~ 28037245 (+)
G1967965 NA other upstream 1087612 26654905 ~ 26655336 (+)
G1967032 NA other upstream 1909627 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 2951354 24788926 ~ 24791594 (+)
G1965396 NA other upstream 3175801 24565731 ~ 24567147 (+)
G1970001 NA other downstream 670111 28413600 ~ 28413919 (+)
G1971104 NA other downstream 1730631 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 2580024 30092455 ~ 30330735 (+)
G1972242 NA other downstream 2886839 30630328 ~ 30632667 (+)
G1972244 NA other downstream 2893565 30637054 ~ 30655039 (+)

Expression


Co-expression Network