Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969223 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 27773379 ~ 27773755 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2251359 | True | 357 | lncRNA | 0.48 | 2 | 27773379 | 27773755 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944371 | NA | coding | upstream | 52278 | 27715016 ~ 27721101 (+) |
| calm1a | LOC102293206 | coding | upstream | 64617 | 27694848 ~ 27708762 (+) |
| LOC110505726 | psmc1 | coding | upstream | 102965 | 27664997 ~ 27670414 (+) |
| LOC110505722 | LOC106611215 | coding | upstream | 671829 | 27099673 ~ 27101550 (+) |
| LOC110505721 | ccdc88c | coding | upstream | 673669 | 26988390 ~ 27099710 (+) |
| LOC110505733 | LOC106611173 | coding | downstream | 86261 | 27860016 ~ 27985110 (+) |
| nfkbiab | LOC106611175 | coding | downstream | 232695 | 28006450 ~ 28009481 (+) |
| ppp2r3c | LOC106611177 | coding | downstream | 267846 | 28041601 ~ 28051126 (+) |
| LOC110505741 | LOC106611180 | coding | downstream | 284437 | 28058192 ~ 28065667 (+) |
| gemin2 | LOC106611181 | coding | downstream | 320750 | 28094505 ~ 28099259 (+) |
| G1969206 | NA | non-coding | upstream | 29890 | 27742948 ~ 27743489 (+) |
| G1969177 | NA | non-coding | upstream | 82188 | 27690629 ~ 27691191 (+) |
| G1969131 | NA | non-coding | upstream | 154278 | 27618853 ~ 27619101 (+) |
| G1969130 | NA | non-coding | upstream | 155502 | 27617645 ~ 27617877 (+) |
| G1969276 | NA | non-coding | downstream | 82527 | 27856282 ~ 27856719 (+) |
| G1969356 | LOC106611176 | non-coding | downstream | 238106 | 28011861 ~ 28014274 (+) |
| G1969369 | NA | non-coding | downstream | 263273 | 28037028 ~ 28037245 (+) |
| G1969263 | NA | non-coding | downstream | 291971 | 28065726 ~ 28066649 (+) |
| G1967965 | NA | other | upstream | 1118043 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 1940058 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 2981785 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 3206232 | 24565731 ~ 24567147 (+) |
| G1970001 | NA | other | downstream | 639845 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 1700365 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 2549758 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2856573 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2863299 | 30637054 ~ 30655039 (+) |
