G1969369


Basic Information

Item Value
gene id G1969369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 28037028 ~ 28037245 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2251516
taaataagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcataaaaaatcctacaatgtgattttctggattttttttctcattttgtttgtcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacttgcacaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2251516 True 218 lncRNA 0.32 1 28037028 28037245

Neighbor

gene id symbol gene type direction distance location
nfkbiab LOC106611175 coding upstream 27547 28006450 ~ 28009481 (+)
LOC110505733 LOC106611173 coding upstream 51918 27860016 ~ 27985110 (+)
LOC118944371 NA coding upstream 315927 27715016 ~ 27721101 (+)
calm1a LOC102293206 coding upstream 328266 27694848 ~ 27708762 (+)
LOC110505726 psmc1 coding upstream 366614 27664997 ~ 27670414 (+)
ppp2r3c LOC106611177 coding downstream 4356 28041601 ~ 28051126 (+)
LOC110505741 LOC106611180 coding downstream 20947 28058192 ~ 28065667 (+)
gemin2 LOC106611181 coding downstream 57260 28094505 ~ 28099259 (+)
pnn LOC100380709 coding downstream 62409 28099654 ~ 28106376 (+)
LOC110505743 LOC106611182 coding downstream 511303 28548548 ~ 28601863 (+)
G1969356 LOC106611176 non-coding upstream 22754 28011861 ~ 28014274 (+)
G1969276 NA non-coding upstream 180309 27856282 ~ 27856719 (+)
G1969198 NA non-coding upstream 222113 27727847 ~ 27814915 (+)
G1969223 NA non-coding upstream 263273 27773379 ~ 27773755 (+)
G1969206 NA non-coding upstream 293539 27742948 ~ 27743489 (+)
G1969263 NA non-coding downstream 28481 28065726 ~ 28066649 (+)
G1969384 NA non-coding downstream 79326 28116571 ~ 28116774 (+)
G1969387 NA non-coding downstream 93237 28130482 ~ 28130702 (+)
G1969397 NA non-coding downstream 105953 28143198 ~ 28143576 (+)
LOC110505721 ccdc88c other upstream 948712 26988390 ~ 27099710 (+)
G1967965 NA other upstream 1381692 26654905 ~ 26655336 (+)
G1967032 NA other upstream 2203707 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 3245434 24788926 ~ 24791594 (+)
G1965396 NA other upstream 3469881 24565731 ~ 24567147 (+)
G1970001 NA other downstream 376355 28413600 ~ 28413919 (+)
G1971104 NA other downstream 1436875 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 2286268 30092455 ~ 30330735 (+)
G1972242 NA other downstream 2593083 30630328 ~ 30632667 (+)
G1972244 NA other downstream 2599809 30637054 ~ 30655039 (+)

Expression


Co-expression Network