Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969692 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28054089 ~ 28054386 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ORF2 protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2251885 | True | 298 | lncRNA | 0.43 | 1 | 28054089 | 28054386 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| fam177a1 | LOC106611178 | coding | downstream | 572 | 28050988 ~ 28053517 (-) |
| LOC110504219 | LOC106611176 | coding | downstream | 14064 | 28014417 ~ 28040025 (-) |
| LOC110505736 | LOC106611176 | coding | downstream | 39776 | 28011861 ~ 28014313 (-) |
| LOC110505734 | LOC106611217 | coding | downstream | 65138 | 27985550 ~ 27988951 (-) |
| brms1la | LOC106611172 | coding | downstream | 195490 | 27854619 ~ 27858599 (-) |
| ctage5 | LOC106611179 | coding | upstream | 11714 | 28066100 ~ 28094235 (-) |
| LOC110505745 | LOC106611187 | coding | upstream | 1059229 | 29113615 ~ 29122177 (-) |
| daam1a | daam1 | coding | upstream | 1080975 | 29135361 ~ 29206222 (-) |
| LOC110504220 | LOC106601062 | coding | upstream | 1162995 | 29217381 ~ 29221732 (-) |
| LOC110505749 | NA | coding | upstream | 1166337 | 29220723 ~ 29266875 (-) |
| G1969686 | NA | non-coding | downstream | 23373 | 28030213 ~ 28030716 (-) |
| G1969683 | NA | non-coding | downstream | 25443 | 28028323 ~ 28028646 (-) |
| G1969678 | NA | non-coding | downstream | 33894 | 28019975 ~ 28020195 (-) |
| G1969662 | NA | non-coding | downstream | 42348 | 28011542 ~ 28011741 (-) |
| G1969617 | LOC106611173 | non-coding | downstream | 131830 | 27921305 ~ 27922259 (-) |
| G1969694 | NA | non-coding | upstream | 3119 | 28057505 ~ 28057723 (-) |
| G1969695 | NA | non-coding | upstream | 3852 | 28058238 ~ 28058742 (-) |
| G1969668 | LOC106611180 | non-coding | upstream | 5482 | 28059868 ~ 28060516 (-) |
| G1969670 | NA | non-coding | upstream | 7239 | 28061625 ~ 28064306 (-) |
| G1969703 | NA | non-coding | upstream | 54276 | 28108662 ~ 28109006 (-) |
| LOC110505716 | LOC106024658 | other | downstream | 1288718 | 26716542 ~ 26765410 (-) |
| G1967882 | NA | other | downstream | 1515381 | 26535364 ~ 26538708 (-) |
| G1964728 | NA | other | downstream | 4625445 | 23425563 ~ 23428841 (-) |
| G1964592 | LOC106569888 | other | downstream | 4831586 | 23221973 ~ 23222503 (-) |
| G1964564 | NA | other | downstream | 4885976 | 23165032 ~ 23168113 (-) |
| G1969699 | LOC100380709 | other | upstream | 45535 | 28099921 ~ 28101436 (-) |
| G1969724 | NA | other | upstream | 89052 | 28143438 ~ 28143762 (-) |
| G1970606 | NA | other | upstream | 803554 | 28857940 ~ 28861987 (-) |
| G1971357 | LOC106611199 | other | upstream | 1468374 | 29522760 ~ 29525046 (-) |
| G1972454 | NA | other | upstream | 1927898 | 29982284 ~ 29982900 (-) |
