Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969263 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28065726 ~ 28066649 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2251404 | True | 924 | lncRNA | 0.38 | 1 | 28065726 | 28066649 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505741 | LOC106611180 | coding | upstream | 60 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 14600 | 28041601 ~ 28051126 (+) |
| nfkbiab | LOC106611175 | coding | upstream | 56245 | 28006450 ~ 28009481 (+) |
| LOC110505733 | LOC106611173 | coding | upstream | 80616 | 27860016 ~ 27985110 (+) |
| LOC118944371 | NA | coding | upstream | 344625 | 27715016 ~ 27721101 (+) |
| gemin2 | LOC106611181 | coding | downstream | 27856 | 28094505 ~ 28099259 (+) |
| pnn | LOC100380709 | coding | downstream | 33005 | 28099654 ~ 28106376 (+) |
| LOC110505743 | LOC106611182 | coding | downstream | 481899 | 28548548 ~ 28601863 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 1034413 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 1039558 | 29106207 ~ 29114965 (+) |
| G1969369 | NA | non-coding | upstream | 28481 | 28037028 ~ 28037245 (+) |
| G1969356 | LOC106611176 | non-coding | upstream | 51452 | 28011861 ~ 28014274 (+) |
| G1969276 | NA | non-coding | upstream | 209007 | 27856282 ~ 27856719 (+) |
| G1969223 | NA | non-coding | upstream | 291971 | 27773379 ~ 27773755 (+) |
| G1969384 | NA | non-coding | downstream | 49922 | 28116571 ~ 28116774 (+) |
| G1969387 | NA | non-coding | downstream | 63833 | 28130482 ~ 28130702 (+) |
| G1969397 | NA | non-coding | downstream | 76549 | 28143198 ~ 28143576 (+) |
| G1969408 | NA | non-coding | downstream | 94660 | 28161309 ~ 28161695 (+) |
| G1969418 | NA | non-coding | downstream | 109208 | 28175857 ~ 28176402 (+) |
| LOC110505721 | ccdc88c | other | upstream | 977410 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 1410390 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 2232405 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 3274132 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 3498579 | 24565731 ~ 24567147 (+) |
| G1970001 | NA | other | downstream | 346951 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 1407471 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 2256864 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2563679 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2570405 | 30637054 ~ 30655039 (+) |
