G1969420


Basic Information

Item Value
gene id G1969420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 28177601 ~ 28177905 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2251568
atgtaaatagtccgggtggccatttgattaattgttcagcagtcttatggcttgggggtagaagctattaaggaaccttttggaactagacttggcgctctggctcaaatttaattggtcacatacacatggttagcagatgttactgtgagtgtagcgaaatgcttatgtttctagatctgacagtacagcagtatctaacaggtaatatctaacaattccacaacaaaatctaatatctaacaaattccacgacaaaacctaatacacacaatctagtcaaggaatgggataagaatatatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2251568 True 305 lncRNA 0.37 1 28177601 28177905

Neighbor

gene id symbol gene type direction distance location
pnn LOC100380709 coding upstream 71225 28099654 ~ 28106376 (+)
gemin2 LOC106611181 coding upstream 78342 28094505 ~ 28099259 (+)
LOC110505741 LOC106611180 coding upstream 111935 28058192 ~ 28065667 (+)
ppp2r3c LOC106611177 coding upstream 126475 28041601 ~ 28051126 (+)
nfkbiab LOC106611175 coding upstream 168120 28006450 ~ 28009481 (+)
LOC110505743 LOC106611182 coding downstream 370643 28548548 ~ 28601863 (+)
LOC110504335 LOC106611218 coding downstream 923157 29101062 ~ 29106042 (+)
ccdc175 LOC106611218 coding downstream 928302 29106207 ~ 29114965 (+)
LOC110505748 gpr135 coding downstream 951138 29129043 ~ 29136833 (+)
gjb9a LOC106611221 coding downstream 1094097 29272002 ~ 29274608 (+)
G1969418 NA non-coding upstream 1199 28175857 ~ 28176402 (+)
G1969408 NA non-coding upstream 15906 28161309 ~ 28161695 (+)
G1969397 NA non-coding upstream 34025 28143198 ~ 28143576 (+)
G1969387 NA non-coding upstream 46899 28130482 ~ 28130702 (+)
G1969384 NA non-coding upstream 60827 28116571 ~ 28116774 (+)
G1969428 NA non-coding downstream 12640 28190545 ~ 28190864 (+)
G1969814 NA non-coding downstream 104786 28282691 ~ 28283744 (+)
G1969820 NA non-coding downstream 115086 28292991 ~ 28293287 (+)
G1969824 NA non-coding downstream 117097 28295002 ~ 28295289 (+)
G1969830 NA non-coding downstream 124520 28302425 ~ 28302737 (+)
LOC110505721 ccdc88c other upstream 1089285 26988390 ~ 27099710 (+)
G1967965 NA other upstream 1522265 26654905 ~ 26655336 (+)
G1967032 NA other upstream 2344280 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 3386007 24788926 ~ 24791594 (+)
G1965396 NA other upstream 3610454 24565731 ~ 24567147 (+)
G1970001 NA other downstream 235695 28413600 ~ 28413919 (+)
G1971104 NA other downstream 1296215 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 2145608 30092455 ~ 30330735 (+)
G1972242 NA other downstream 2452423 30630328 ~ 30632667 (+)
G1972244 NA other downstream 2459149 30637054 ~ 30655039 (+)

Expression


Co-expression Network