Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969772 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28202709 ~ 28245974 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2251968 | True | 272 | lncRNA | 0.37 | 2 | 28202709 | 28245974 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ctage5 | LOC106611179 | coding | downstream | 108474 | 28066100 ~ 28094235 (-) |
| fam177a1 | LOC106611178 | coding | downstream | 149192 | 28050988 ~ 28053517 (-) |
| LOC110504219 | LOC106611176 | coding | downstream | 162684 | 28014417 ~ 28040025 (-) |
| LOC110505736 | LOC106611176 | coding | downstream | 188396 | 28011861 ~ 28014313 (-) |
| LOC110505734 | LOC106611217 | coding | downstream | 213758 | 27985550 ~ 27988951 (-) |
| LOC110505745 | LOC106611187 | coding | upstream | 867641 | 29113615 ~ 29122177 (-) |
| daam1a | daam1 | coding | upstream | 889387 | 29135361 ~ 29206222 (-) |
| LOC110504220 | LOC106601062 | coding | upstream | 971407 | 29217381 ~ 29221732 (-) |
| LOC110505749 | NA | coding | upstream | 974749 | 29220723 ~ 29266875 (-) |
| ptp4a2a | LOC106611191 | coding | upstream | 1021078 | 29267052 ~ 29270880 (-) |
| G1969754 | NA | non-coding | downstream | 22339 | 28180135 ~ 28180370 (-) |
| G1969729 | NA | non-coding | downstream | 52974 | 28149517 ~ 28149735 (-) |
| G1969714 | NA | non-coding | downstream | 80152 | 28121720 ~ 28122557 (-) |
| G1969713 | NA | non-coding | downstream | 81105 | 28121290 ~ 28121604 (-) |
| G1969712 | NA | non-coding | downstream | 81642 | 28120812 ~ 28121067 (-) |
| G1969874 | NA | non-coding | upstream | 32357 | 28278331 ~ 28278536 (-) |
| G1969881 | NA | non-coding | upstream | 47012 | 28292986 ~ 28293351 (-) |
| G1969885 | NA | non-coding | upstream | 53305 | 28299279 ~ 28299601 (-) |
| G1969886 | NA | non-coding | upstream | 54438 | 28300412 ~ 28301138 (-) |
| G1970163 | NA | non-coding | upstream | 287531 | 28533505 ~ 28534036 (-) |
| G1969724 | NA | other | downstream | 58947 | 28143438 ~ 28143762 (-) |
| G1969699 | LOC100380709 | other | downstream | 101273 | 28099921 ~ 28101436 (-) |
| LOC110505716 | LOC106024658 | other | downstream | 1437338 | 26716542 ~ 26765410 (-) |
| G1967882 | NA | other | downstream | 1664001 | 26535364 ~ 26538708 (-) |
| G1964728 | NA | other | downstream | 4774065 | 23425563 ~ 23428841 (-) |
| G1970606 | NA | other | upstream | 611966 | 28857940 ~ 28861987 (-) |
| G1971357 | LOC106611199 | other | upstream | 1276786 | 29522760 ~ 29525046 (-) |
| G1972454 | NA | other | upstream | 1736310 | 29982284 ~ 29982900 (-) |
| G1972746 | npas3 | other | upstream | 2261577 | 30507551 ~ 30508058 (-) |
| G1972810 | NA | other | upstream | 2370614 | 30616588 ~ 30683403 (-) |
