Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969814 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28282691 ~ 28283744 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2252014 | True | 1054 | lncRNA | 0.46 | 1 | 28282691 | 28283744 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnn | LOC100380709 | coding | upstream | 176315 | 28099654 ~ 28106376 (+) |
| gemin2 | LOC106611181 | coding | upstream | 183432 | 28094505 ~ 28099259 (+) |
| LOC110505741 | LOC106611180 | coding | upstream | 217025 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 231565 | 28041601 ~ 28051126 (+) |
| nfkbiab | LOC106611175 | coding | upstream | 273210 | 28006450 ~ 28009481 (+) |
| LOC110505743 | LOC106611182 | coding | downstream | 264804 | 28548548 ~ 28601863 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 817318 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 822463 | 29106207 ~ 29114965 (+) |
| LOC110505748 | gpr135 | coding | downstream | 845299 | 29129043 ~ 29136833 (+) |
| gjb9a | LOC106611221 | coding | downstream | 988258 | 29272002 ~ 29274608 (+) |
| G1969428 | NA | non-coding | upstream | 91827 | 28190545 ~ 28190864 (+) |
| G1969420 | NA | non-coding | upstream | 104786 | 28177601 ~ 28177905 (+) |
| G1969418 | NA | non-coding | upstream | 106289 | 28175857 ~ 28176402 (+) |
| G1969408 | NA | non-coding | upstream | 120996 | 28161309 ~ 28161695 (+) |
| G1969397 | NA | non-coding | upstream | 139115 | 28143198 ~ 28143576 (+) |
| G1969820 | NA | non-coding | downstream | 9247 | 28292991 ~ 28293287 (+) |
| G1969824 | NA | non-coding | downstream | 11258 | 28295002 ~ 28295289 (+) |
| G1969830 | NA | non-coding | downstream | 18681 | 28302425 ~ 28302737 (+) |
| G1969910 | NA | non-coding | downstream | 56007 | 28339751 ~ 28339955 (+) |
| G1969916 | NA | non-coding | downstream | 61852 | 28345596 ~ 28345820 (+) |
| LOC110505721 | ccdc88c | other | upstream | 1194375 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 1627355 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 2449370 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 3491097 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 3715544 | 24565731 ~ 24567147 (+) |
| G1970001 | NA | other | downstream | 129856 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 1190376 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 2039769 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2346584 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2353310 | 30637054 ~ 30655039 (+) |
