Gene
RNA
| Item | Value |
|---|---|
| gene id | G1969830 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28302425 ~ 28302737 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2252030 | True | 313 | lncRNA | 0.56 | 1 | 28302425 | 28302737 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnn | LOC100380709 | coding | upstream | 196049 | 28099654 ~ 28106376 (+) |
| gemin2 | LOC106611181 | coding | upstream | 203166 | 28094505 ~ 28099259 (+) |
| LOC110505741 | LOC106611180 | coding | upstream | 236759 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 251299 | 28041601 ~ 28051126 (+) |
| nfkbiab | LOC106611175 | coding | upstream | 292944 | 28006450 ~ 28009481 (+) |
| LOC110505743 | LOC106611182 | coding | downstream | 245811 | 28548548 ~ 28601863 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 798325 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 803470 | 29106207 ~ 29114965 (+) |
| LOC110505748 | gpr135 | coding | downstream | 826306 | 29129043 ~ 29136833 (+) |
| gjb9a | LOC106611221 | coding | downstream | 969265 | 29272002 ~ 29274608 (+) |
| G1969824 | NA | non-coding | upstream | 7136 | 28295002 ~ 28295289 (+) |
| G1969820 | NA | non-coding | upstream | 9138 | 28292991 ~ 28293287 (+) |
| G1969814 | NA | non-coding | upstream | 18681 | 28282691 ~ 28283744 (+) |
| G1969428 | NA | non-coding | upstream | 111561 | 28190545 ~ 28190864 (+) |
| G1969420 | NA | non-coding | upstream | 124520 | 28177601 ~ 28177905 (+) |
| G1969910 | NA | non-coding | downstream | 37014 | 28339751 ~ 28339955 (+) |
| G1969916 | NA | non-coding | downstream | 42859 | 28345596 ~ 28345820 (+) |
| G1969935 | NA | non-coding | downstream | 56964 | 28359701 ~ 28360001 (+) |
| G1969990 | NA | non-coding | downstream | 97616 | 28400353 ~ 28400583 (+) |
| G1969992 | NA | non-coding | downstream | 100544 | 28403281 ~ 28403491 (+) |
| LOC110505721 | ccdc88c | other | upstream | 1214109 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 1647089 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 2469104 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 3510831 | 24788926 ~ 24791594 (+) |
| G1965396 | NA | other | upstream | 3735278 | 24565731 ~ 24567147 (+) |
| G1970001 | NA | other | downstream | 110863 | 28413600 ~ 28413919 (+) |
| G1971104 | NA | other | downstream | 1171383 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 2020776 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2327591 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2334317 | 30637054 ~ 30655039 (+) |
