G1969910


Basic Information

Item Value
gene id G1969910
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 28339751 ~ 28339955 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2252112
GAAAGGAATTGTGGTTTATAACATATGACATCTATGACATCCGATACGGAACGCAGTTTATTAGATGAAACAGACGGAATTTTACTTCTGTAGCTTATgtctgtgtaacggttttcttccgctgaaggagaggaggaccaaaacgcagcgtggttagtgttaaacatctttaataaagacgataaccgagaacactacaaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2252112 True 205 lncRNA 0.38 1 28339751 28339955

Neighbor

gene id symbol gene type direction distance location
pnn LOC100380709 coding upstream 233375 28099654 ~ 28106376 (+)
gemin2 LOC106611181 coding upstream 240492 28094505 ~ 28099259 (+)
LOC110505741 LOC106611180 coding upstream 274085 28058192 ~ 28065667 (+)
ppp2r3c LOC106611177 coding upstream 288625 28041601 ~ 28051126 (+)
nfkbiab LOC106611175 coding upstream 330270 28006450 ~ 28009481 (+)
LOC110505743 LOC106611182 coding downstream 208593 28548548 ~ 28601863 (+)
LOC110504335 LOC106611218 coding downstream 761107 29101062 ~ 29106042 (+)
ccdc175 LOC106611218 coding downstream 766252 29106207 ~ 29114965 (+)
LOC110505748 gpr135 coding downstream 789088 29129043 ~ 29136833 (+)
gjb9a LOC106611221 coding downstream 932047 29272002 ~ 29274608 (+)
G1969830 NA non-coding upstream 37014 28302425 ~ 28302737 (+)
G1969824 NA non-coding upstream 44462 28295002 ~ 28295289 (+)
G1969820 NA non-coding upstream 46464 28292991 ~ 28293287 (+)
G1969814 NA non-coding upstream 56007 28282691 ~ 28283744 (+)
G1969428 NA non-coding upstream 148887 28190545 ~ 28190864 (+)
G1969916 NA non-coding downstream 5641 28345596 ~ 28345820 (+)
G1969935 NA non-coding downstream 19746 28359701 ~ 28360001 (+)
G1969990 NA non-coding downstream 60398 28400353 ~ 28400583 (+)
G1969992 NA non-coding downstream 63326 28403281 ~ 28403491 (+)
G1969993 NA non-coding downstream 66095 28406050 ~ 28406358 (+)
LOC110505721 ccdc88c other upstream 1251435 26988390 ~ 27099710 (+)
G1967965 NA other upstream 1684415 26654905 ~ 26655336 (+)
G1967032 NA other upstream 2506430 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 3548157 24788926 ~ 24791594 (+)
G1965396 NA other upstream 3772604 24565731 ~ 24567147 (+)
G1970001 NA other downstream 73645 28413600 ~ 28413919 (+)
G1971104 NA other downstream 1134165 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 1983558 30092455 ~ 30330735 (+)
G1972242 NA other downstream 2290373 30630328 ~ 30632667 (+)
G1972244 NA other downstream 2297099 30637054 ~ 30655039 (+)

Expression


Co-expression Network