G1970153


Basic Information

Item Value
gene id G1970153
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 28523605 ~ 28524010 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2252362
aaactgtatttttttgtgaagaatcaacaacaagtgggacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacagcccaaaaactgacaaattgggcgtgcaaaattattcagcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtctcttggggtatatctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2252362 True 406 lncRNA 0.40 1 28523605 28524010

Neighbor

gene id symbol gene type direction distance location
pnn LOC100380709 coding upstream 417229 28099654 ~ 28106376 (+)
gemin2 LOC106611181 coding upstream 424346 28094505 ~ 28099259 (+)
LOC110505741 LOC106611180 coding upstream 457939 28058192 ~ 28065667 (+)
ppp2r3c LOC106611177 coding upstream 472479 28041601 ~ 28051126 (+)
nfkbiab LOC106611175 coding upstream 514124 28006450 ~ 28009481 (+)
LOC110505743 LOC106611182 coding downstream 24538 28548548 ~ 28601863 (+)
LOC110504335 LOC106611218 coding downstream 577052 29101062 ~ 29106042 (+)
ccdc175 LOC106611218 coding downstream 582197 29106207 ~ 29114965 (+)
LOC110505748 gpr135 coding downstream 605033 29129043 ~ 29136833 (+)
gjb9a LOC106611221 coding downstream 747992 29272002 ~ 29274608 (+)
G1970139 NA non-coding upstream 9684 28513648 ~ 28513921 (+)
G1970069 NA non-coding upstream 49368 28474035 ~ 28474237 (+)
G1970034 NA non-coding upstream 78445 28444858 ~ 28445160 (+)
G1969993 NA non-coding upstream 117247 28406050 ~ 28406358 (+)
G1969992 NA non-coding upstream 120114 28403281 ~ 28403491 (+)
G1970155 NA non-coding downstream 2149 28526159 ~ 28526461 (+)
G1970171 NA non-coding downstream 16508 28540518 ~ 28541502 (+)
G1970176 NA non-coding downstream 19066 28543076 ~ 28543434 (+)
G1970178 NA non-coding downstream 22299 28546309 ~ 28546648 (+)
G1970179 NA non-coding downstream 22916 28546926 ~ 28547274 (+)
G1970001 NA other upstream 109686 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 1435289 26988390 ~ 27099710 (+)
G1967965 NA other upstream 1868269 26654905 ~ 26655336 (+)
G1967032 NA other upstream 2690284 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 3732011 24788926 ~ 24791594 (+)
G1971104 NA other downstream 950110 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 1799503 30092455 ~ 30330735 (+)
G1972242 NA other downstream 2106318 30630328 ~ 30632667 (+)
G1972244 NA other downstream 2113044 30637054 ~ 30655039 (+)
G1972245 NA other downstream 2135394 30659404 ~ 30679995 (+)

Expression


Co-expression Network