Gene
RNA
| Item | Value |
|---|---|
| gene id | G1970181 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28547774 ~ 28548258 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2252390 | True | 485 | lncRNA | 0.42 | 1 | 28547774 | 28548258 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnn | LOC100380709 | coding | upstream | 441398 | 28099654 ~ 28106376 (+) |
| gemin2 | LOC106611181 | coding | upstream | 448515 | 28094505 ~ 28099259 (+) |
| LOC110505741 | LOC106611180 | coding | upstream | 482108 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 496648 | 28041601 ~ 28051126 (+) |
| nfkbiab | LOC106611175 | coding | upstream | 538293 | 28006450 ~ 28009481 (+) |
| LOC110505743 | LOC106611182 | coding | downstream | 290 | 28548548 ~ 28601863 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 552804 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 557949 | 29106207 ~ 29114965 (+) |
| LOC110505748 | gpr135 | coding | downstream | 580785 | 29129043 ~ 29136833 (+) |
| gjb9a | LOC106611221 | coding | downstream | 723744 | 29272002 ~ 29274608 (+) |
| G1970180 | NA | non-coding | upstream | 71 | 28547431 ~ 28547703 (+) |
| G1970179 | NA | non-coding | upstream | 500 | 28546926 ~ 28547274 (+) |
| G1970178 | NA | non-coding | upstream | 1126 | 28546309 ~ 28546648 (+) |
| G1970176 | NA | non-coding | upstream | 4340 | 28543076 ~ 28543434 (+) |
| G1970171 | NA | non-coding | upstream | 6272 | 28540518 ~ 28541502 (+) |
| G1970209 | NA | non-coding | downstream | 32317 | 28580575 ~ 28581455 (+) |
| G1970470 | NA | non-coding | downstream | 224377 | 28772635 ~ 28772950 (+) |
| G1970601 | NA | non-coding | downstream | 308823 | 28857081 ~ 28861957 (+) |
| G1970675 | NA | non-coding | downstream | 407680 | 28955938 ~ 28960970 (+) |
| G1970001 | NA | other | upstream | 133855 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 1459458 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 1892438 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 2714453 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 3756180 | 24788926 ~ 24791594 (+) |
| G1971104 | NA | other | downstream | 925862 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 1775255 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2082070 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2088796 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 2111146 | 30659404 ~ 30679995 (+) |
