Gene
RNA
| Item | Value |
|---|---|
| gene id | G1970209 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 28580575 ~ 28581455 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2252418 | True | 222 | lncRNA | 0.38 | 2 | 28580575 | 28581455 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pnn | LOC100380709 | coding | upstream | 474199 | 28099654 ~ 28106376 (+) |
| gemin2 | LOC106611181 | coding | upstream | 481316 | 28094505 ~ 28099259 (+) |
| LOC110505741 | LOC106611180 | coding | upstream | 514909 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 529449 | 28041601 ~ 28051126 (+) |
| nfkbiab | LOC106611175 | coding | upstream | 571094 | 28006450 ~ 28009481 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 519607 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 524752 | 29106207 ~ 29114965 (+) |
| LOC110505748 | gpr135 | coding | downstream | 547588 | 29129043 ~ 29136833 (+) |
| gjb9a | LOC106611221 | coding | downstream | 690547 | 29272002 ~ 29274608 (+) |
| adprs | adprhl2 | coding | downstream | 739879 | 29321334 ~ 29326173 (+) |
| G1970181 | NA | non-coding | upstream | 32317 | 28547774 ~ 28548258 (+) |
| G1970180 | NA | non-coding | upstream | 32872 | 28547431 ~ 28547703 (+) |
| G1970179 | NA | non-coding | upstream | 33301 | 28546926 ~ 28547274 (+) |
| G1970178 | NA | non-coding | upstream | 33927 | 28546309 ~ 28546648 (+) |
| G1970176 | NA | non-coding | upstream | 37141 | 28543076 ~ 28543434 (+) |
| LOC110505743 | LOC106611182 | non-coding | downstream | 19740 | 28548548 ~ 28601863 (+) |
| G1970470 | NA | non-coding | downstream | 191180 | 28772635 ~ 28772950 (+) |
| G1970601 | NA | non-coding | downstream | 275626 | 28857081 ~ 28861957 (+) |
| G1970675 | NA | non-coding | downstream | 374483 | 28955938 ~ 28960970 (+) |
| G1970759 | NA | non-coding | downstream | 403532 | 28984987 ~ 28985249 (+) |
| G1970001 | NA | other | upstream | 166656 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 1492259 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 1925239 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 2747254 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 3788981 | 24788926 ~ 24791594 (+) |
| G1971104 | NA | other | downstream | 892665 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 1742058 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 2048873 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 2055599 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 2077949 | 30659404 ~ 30679995 (+) |
