G1970776


Basic Information

Item Value
gene id G1970776
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 28995392 ~ 28995601 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2253009
caccaagacagttctGAAGAGGGCATTACAAAAGCTTTTCCCtcctcaggagaatgaaaagatcaaatcaaatcaaattttatttgtcacatatacatggttagcagatgttaatgcgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataaccaacgagtaatctagctaacaattccaaaactactaccttatac

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2253009 True 210 lncRNA 0.37 1 28995392 28995601

Neighbor

gene id symbol gene type direction distance location
LOC110505743 LOC106611182 coding upstream 393529 28548548 ~ 28601863 (+)
pnn LOC100380709 coding upstream 889016 28099654 ~ 28106376 (+)
gemin2 LOC106611181 coding upstream 896133 28094505 ~ 28099259 (+)
LOC110505741 LOC106611180 coding upstream 929726 28058192 ~ 28065667 (+)
ppp2r3c LOC106611177 coding upstream 944266 28041601 ~ 28051126 (+)
LOC110504335 LOC106611218 coding downstream 105461 29101062 ~ 29106042 (+)
ccdc175 LOC106611218 coding downstream 110606 29106207 ~ 29114965 (+)
LOC110505748 gpr135 coding downstream 133442 29129043 ~ 29136833 (+)
gjb9a LOC106611221 coding downstream 276401 29272002 ~ 29274608 (+)
adprs adprhl2 coding downstream 325733 29321334 ~ 29326173 (+)
G1970770 NA non-coding upstream 3358 28991791 ~ 28992034 (+)
G1970767 NA non-coding upstream 5668 28989519 ~ 28989724 (+)
G1970759 NA non-coding upstream 10143 28984987 ~ 28985249 (+)
G1970675 NA non-coding upstream 34422 28955938 ~ 28960970 (+)
G1970601 NA non-coding upstream 133435 28857081 ~ 28861957 (+)
G1970783 NA non-coding downstream 4175 28999776 ~ 29000493 (+)
G1970789 NA non-coding downstream 8789 29004390 ~ 29004751 (+)
G1970793 NA non-coding downstream 10764 29006365 ~ 29006614 (+)
G1970817 NA non-coding downstream 35825 29031426 ~ 29031838 (+)
G1970843 NA non-coding downstream 54862 29050463 ~ 29050675 (+)
G1970001 NA other upstream 581473 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 1907076 26988390 ~ 27099710 (+)
G1967965 NA other upstream 2340056 26654905 ~ 26655336 (+)
G1967032 NA other upstream 3162071 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 4203798 24788926 ~ 24791594 (+)
G1971104 NA other downstream 478519 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 1327912 30092455 ~ 30330735 (+)
G1972242 NA other downstream 1634727 30630328 ~ 30632667 (+)
G1972244 NA other downstream 1641453 30637054 ~ 30655039 (+)
G1972245 NA other downstream 1663803 30659404 ~ 30679995 (+)

Expression


Co-expression Network