Gene
RNA
| Item | Value |
|---|---|
| gene id | G1970793 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29006365 ~ 29006614 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2253026 | True | 250 | lncRNA | 0.38 | 1 | 29006365 | 29006614 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505743 | LOC106611182 | coding | upstream | 404502 | 28548548 ~ 28601863 (+) |
| pnn | LOC100380709 | coding | upstream | 899989 | 28099654 ~ 28106376 (+) |
| gemin2 | LOC106611181 | coding | upstream | 907106 | 28094505 ~ 28099259 (+) |
| LOC110505741 | LOC106611180 | coding | upstream | 940699 | 28058192 ~ 28065667 (+) |
| ppp2r3c | LOC106611177 | coding | upstream | 955239 | 28041601 ~ 28051126 (+) |
| LOC110504335 | LOC106611218 | coding | downstream | 94448 | 29101062 ~ 29106042 (+) |
| ccdc175 | LOC106611218 | coding | downstream | 99593 | 29106207 ~ 29114965 (+) |
| LOC110505748 | gpr135 | coding | downstream | 122429 | 29129043 ~ 29136833 (+) |
| gjb9a | LOC106611221 | coding | downstream | 265388 | 29272002 ~ 29274608 (+) |
| adprs | adprhl2 | coding | downstream | 314720 | 29321334 ~ 29326173 (+) |
| G1970789 | NA | non-coding | upstream | 1614 | 29004390 ~ 29004751 (+) |
| G1970783 | NA | non-coding | upstream | 5872 | 28999776 ~ 29000493 (+) |
| G1970776 | NA | non-coding | upstream | 10764 | 28995392 ~ 28995601 (+) |
| G1970770 | NA | non-coding | upstream | 14331 | 28991791 ~ 28992034 (+) |
| G1970767 | NA | non-coding | upstream | 16641 | 28989519 ~ 28989724 (+) |
| G1970817 | NA | non-coding | downstream | 24812 | 29031426 ~ 29031838 (+) |
| G1970843 | NA | non-coding | downstream | 43849 | 29050463 ~ 29050675 (+) |
| G1970898 | NA | non-coding | downstream | 137253 | 29143867 ~ 29144796 (+) |
| G1970001 | NA | other | upstream | 592446 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 1918049 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 2351029 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 3173044 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 4214771 | 24788926 ~ 24791594 (+) |
| G1971104 | NA | other | downstream | 467506 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 1316899 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 1623714 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 1630440 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 1652790 | 30659404 ~ 30679995 (+) |
