XLOC_038622 (CABZ01074307.2)


Basic Information

Item Value
gene id XLOC_038622
gene name CABZ01074307.2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NW_003336534.1
NCBI id KN150487.1
chromosome length 123701
location 23438 ~ 31563 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00076067
TAGCGCACACACTCTGAGCATGCGTGCAGGTCTCGGCACTCTTCAGCTCTGAGCAGTACTCCGGCTCTCCTCAGCACACATCCGCATTCACTCTCTGCTtcccttgttttgtttttatgttcagCCACTCAAATGATGATGACCACACCTACAGGACCAGAGGCAAAtcgCTTCATCCGTGCGGACACTAAAGACTGTGAGGACTCCAGCTCCCCCAAACACCACCCCATCAACGGCAGCGCCACCAACGGGACAGCAGAGGACTGTTCGCCCAGTGAGATGGAGACGGACGAGCCGGACGATGAGCTCAGTGTGGAGCAGGGTGTGTCCTCGGAGAGCGACAGCAGCAGTCTGGCTGAGGAGCAGAAGCTGGAGAACGGACCCTCACTGCTGGAGCCCTGCAGGAGACTCTTCAGCCTGCAGATCACCAACATGGGCAAGACTGACGGAGGAGCCCTGCTGACGGGGGAGCCCCACGCACAAATACATTTCCAGGAGGAGCGTCTCAgcgACAGATGTTACCTGTCCTTAGTCTGGGAGCCGGAGATGAAGAGGAGCTTCTTCAACGAGGCGGCGGTCGAGGACTTCGAAAAGCACCACAGTATGGACTACAAGCCCCAGAAGAAGATGAGCTGCCGGCTGAGGGACTGCATACAGCTCTTCACCACCAAGGAGAAACTGGGCGCCGACGACCCCTGgtACTGCCCCAGCTGTAAGCAGCATCAGCAGGCCACTAAGCAGCTGGACCTGTGGAGTCTGCCGCCGGTGCTGGTGGTCCATCTGAAGCGCTTCTCCTACAGCAGATACATGAGGGACAAGCTGGACACACTGGTGGAGTTCCCTCtgcgGGATCTGGACATGTCAGAGTTCCTCATCAATCCTCATGCCGGGGTCTGCCTCTACGACCTCATCGCCGTCTCCAACCACTATGGAGGGATGGGTGGAGGACACTACACTGCCTATGCCAAGAATGTGGAGGATGGCCAGTGGTACAGCTTTGATGACAGCAGTGTGTCGCCGGCCAGCGAGGAGCAGATCGTGtccaaGGCGGCGTATGTGCTCTTCTACCAGCGCCAGGACACAGTCAGAGGCACAGGCTACTTCGCTCTGGACCGAGAGCCTCCGGCCgagaaggaagaggaggaggaggatgaagatgaggagGATGTGAATGACAGCGAGCAGGAGGAGGACCTGCAGCCCAGCCCAGACGTGTCCATGAGCACCAGCTGAGCTCCAGCGCTCCTCTACAGCCATACCAGCACTGAACACCTGCCCAGTGTACAGCCGGCGCGACTGACTCGAATGCAGGGTTCAGCCGGCCGAgcggatctgtgtgtgtgtgtgtgtgtctgttcacgTTCTGTATTTGTGCACGAGTGAAGGTGTTGACCAGGTGAATGTTCAGAATGTTCTTCTAATCGTGTAAACACTGCGGATGCAGAGTTCTGGTTCAGTCTCTCCGTGTGTTTAGCTGTTAGCGTGTCTGCTAAGCTCTCCATCTGCGGTGTTTGGACAGATGAATGTGCCACATGATGCCGTCTGCTGGATGAGGGATCTCCCGGTGCGGCGGCGATGCCTTTCTCTCAGATTTTCCTTCACCTCAGCCTTAACGGTCCTCTCAGACTGCTGCGTTTGCACACATCTCTCTGCCCGTCAGTCTGGAGCCGGAGACTCTGAGCGGCTCGTGAAGCTGATGGAGGACGGTGTTCGCCGGTCTCCTCCTCCATCTCCTTCTGGCCTTCAGGTTGATGAGTGTCCTCCTGTCTCGGACTGCGCAGGCTGATGAACACTGTACAGCAGAAGAGTCACTCTGTGAGTGCACGTCtggttatctatttatttattgcactGGAGGGCAGGATATGCACTGAATGCGTCTGGGCTCGAGGCCTCCTCCGGGAACCTCCTGTGGGCTTTTGTAAATGAACTGATGTCCTTGCATGACCCGGGGACGTCCTTACGCTGCACTCCAGTTCACTTTGGTTTACATTTgagatgtgcatgtgtgtttaaagACTGACCTAATAAACCTGGACTTAAGTTAAGCCCTGTGTAGTGTCTGTGTCTCCTGCTGGAGTCTCCTCTGGAGTGTGTTCATCAGTCATTTCTCAATCCTGGTCTTCACACATTTTGTTTATGTCATCGTATTGACTGTTTTCAGGTTTGTAGCTTAATAAAGATTAAACACATTCAGTATCAGGATCAGTTTAAGCCCTATATTCATCTCTGCTGAATGATGAGGGTGTTTTCTATAGGCCTCCTgataaagtgaaagtaaaagctGTCCGGTCCAGCCTGTTTCACCAGAGTCCAGCAGATGTCTTGTTCTGACTGTTTGCTCTGCTGCATCTGTATGTTTACTCTACTGCCGTCTAGTGGACACTAGCAATAACACAACTCAACAGGACTGATGATAACAGATGTGTGTAGTGTCCAGAAcactccctactgaaaaaaacagcttaaaccagcctaggctgattggctggttttagctggtcgaccaggctggttttagaggggttttggccatttccagcctggtttccagccatttccagcctggtcttagctggtcaggctggaaaatgaccagctaaaaccagcttgaccagcctatcCAGCCTgaaagcccagccaaaaccagctatatccagcttaaaccaggatgggtaggatggttttagctggatttagctggtcattttccagcctgaccagctaagacaaaACCAGCCTGGCCGACCAGTTAAAACCGTAACTACATTACTTTCACTTCCAGTCTGCTGTGTTTACATTCAGATGTTTCATTAAACTAATGCAGATTGACACTAACACTAATCAATCTAACTCTGTATTGTTGGGTTACTTCTGAAACATTTGATGAACCGAAATTTAATATAACACGTAATTTAATATGTTTGCAATGATAAGGGACGATATAAGTTAGCAGTGAGCATACTGAGGAAGCCACAGTCGAGTATAATCAATCTAAACGGAGTAAATGTAACGTTATTAGTTGTGTATCTGTTGTGTCCCTGTGCTGATGTTGTACTCAGCGTGTTTTATGCTTAAAGTGTTTAAAGCTGTAAACACACTTGTGAGCAGAATACATTTGTCTAAAACGTTATCTTGTAAAGTTGTGTTGAGAATGTGTGCTTCCATCTCCTCTGTCCTCGTAAAGTTTATGAACACAACAGCTTTCACAACCCCAAACACGCGGGAGACGCCTGGCAACAGACGCGTCATCAGGATTTAAGCGCCCGCAGTGTTGCCATGTCCACTGTTTATAAGTGCTGTTCGTGTATTTTAAGAGTATCTAAAGTGGTTATAAGCTGATAACGATGTATTGCTGTTAGTTTCTGTGTTATTGTTAGTATTGTCAAGGTATTATGAACTTGTTCTTGTAAACTTTTcctccaatctggcaacactagTGACGGTTAACTCCTCTTTCCATGTTAAACCTCTGCAGTTGAGTTCATTGAAGCATTTCCAAACACCTGCTGCTCAATATAGTAATTACTGCAGTCTTATTTTATAAAGAAttctattttcattattattacataGTGATCAGATGTGTTGACATCCATTATCTCTGACTTCTCTGTTGTGTCTGCAGAGTGTTTGTGATGGGCTTTTTACCGGGATCTGGCAACCCGGGTATTTCCGCATTCTTCagaaatgaaagtgaaagcagaGTTATCGCCGCCATTTTAGACACGTCTAAAGTCCGTTGTCTGGAAAGCGGGAAATCTTTATTGTGTACTATATTGTGTAATATAAACGCGCTGAAAGGATTCAAGGACGCGTGTGGGGTTTATCTGAGGCG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113364

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00076067 True 3838 mRNA 0.49 9 23438 31563

Neighbor

gene id symbol gene type direction distance location
XLOC_038621 CABZ01074304.1 coding upstream 6295 15455 ~ 17143 (+)
XLOC_038620 kdm5a coding upstream 14359 423 ~ 9079 (+)
XLOC_038623 CABZ01074307.1 coding downstream 139 31702 ~ 60475 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000140_02365746_02379310 USP15 coding CI01000140 null 2364547 ~ 2379310 (-)