G1971043


Basic Information

Item Value
gene id G1971043
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29216815 ~ 29217121 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2253308
gatggagtctgcaaaagacctgagactgggacggagatttgtcttccaacaagacaattatccaaaacagaaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaataactgaaaactgctgttcacaaatgctctccatccaacctcactgagctcgagctgttttgcaaggaggaatgggaaaacatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2253308 True 307 lncRNA 0.42 1 29216815 29217121

Neighbor

gene id symbol gene type direction distance location
LOC110505748 gpr135 coding upstream 83890 29129043 ~ 29136833 (+)
ccdc175 LOC106611218 coding upstream 103151 29106207 ~ 29114965 (+)
LOC110504335 LOC106611218 coding upstream 110773 29101062 ~ 29106042 (+)
LOC110505743 LOC106611182 coding upstream 614952 28548548 ~ 28601863 (+)
pnn LOC100380709 coding upstream 1110439 28099654 ~ 28106376 (+)
gjb9a LOC106611221 coding downstream 54881 29272002 ~ 29274608 (+)
adprs adprhl2 coding downstream 104213 29321334 ~ 29326173 (+)
LOC110505757 cinp coding downstream 109153 29326274 ~ 29334901 (+)
LOC110505758 tecpr2 coding downstream 125330 29342451 ~ 29377849 (+)
LOC110505760 rcor1 coding downstream 164592 29381713 ~ 29392098 (+)
G1971035 NA non-coding upstream 3890 29212710 ~ 29212925 (+)
G1970921 NA non-coding upstream 40104 29176404 ~ 29176711 (+)
G1970898 NA non-coding upstream 72019 29143867 ~ 29144796 (+)
G1971041 NA non-coding downstream 3992 29221113 ~ 29221767 (+)
G1971066 NA non-coding downstream 58987 29276108 ~ 29276731 (+)
G1971071 NA non-coding downstream 64763 29281884 ~ 29282087 (+)
G1971073 NA non-coding downstream 66761 29283882 ~ 29289836 (+)
G1971088 LOC106611192 non-coding downstream 93032 29310153 ~ 29310649 (+)
G1970001 NA other upstream 802896 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 2128499 26988390 ~ 27099710 (+)
G1967965 NA other upstream 2561479 26654905 ~ 26655336 (+)
G1967032 NA other upstream 3383494 25831576 ~ 25833321 (+)
LOC110505697 ypel5 other upstream 4425221 24788926 ~ 24791594 (+)
G1971104 NA other downstream 256999 29474120 ~ 29478383 (+)
LOC110505775 LOC106611224 other downstream 1106392 30092455 ~ 30330735 (+)
G1972242 NA other downstream 1413207 30630328 ~ 30632667 (+)
G1972244 NA other downstream 1419933 30637054 ~ 30655039 (+)
G1972245 NA other downstream 1442283 30659404 ~ 30679995 (+)

Expression


Co-expression Network