Gene
RNA
| Item | Value |
|---|---|
| gene id | G1971041 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29221113 ~ 29221767 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2253306 | True | 480 | lncRNA | 0.39 | 2 | 29221113 | 29221767 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505748 | gpr135 | coding | upstream | 88188 | 29129043 ~ 29136833 (+) |
| ccdc175 | LOC106611218 | coding | upstream | 107449 | 29106207 ~ 29114965 (+) |
| LOC110504335 | LOC106611218 | coding | upstream | 115071 | 29101062 ~ 29106042 (+) |
| LOC110505743 | LOC106611182 | coding | upstream | 619250 | 28548548 ~ 28601863 (+) |
| pnn | LOC100380709 | coding | upstream | 1114737 | 28099654 ~ 28106376 (+) |
| gjb9a | LOC106611221 | coding | downstream | 50235 | 29272002 ~ 29274608 (+) |
| adprs | adprhl2 | coding | downstream | 99567 | 29321334 ~ 29326173 (+) |
| LOC110505757 | cinp | coding | downstream | 104507 | 29326274 ~ 29334901 (+) |
| LOC110505758 | tecpr2 | coding | downstream | 120684 | 29342451 ~ 29377849 (+) |
| LOC110505760 | rcor1 | coding | downstream | 159946 | 29381713 ~ 29392098 (+) |
| G1971043 | NA | non-coding | upstream | 3992 | 29216815 ~ 29217121 (+) |
| G1971035 | NA | non-coding | upstream | 8188 | 29212710 ~ 29212925 (+) |
| G1970921 | NA | non-coding | upstream | 44402 | 29176404 ~ 29176711 (+) |
| G1970898 | NA | non-coding | upstream | 76317 | 29143867 ~ 29144796 (+) |
| G1971066 | NA | non-coding | downstream | 54341 | 29276108 ~ 29276731 (+) |
| G1971071 | NA | non-coding | downstream | 60117 | 29281884 ~ 29282087 (+) |
| G1971073 | NA | non-coding | downstream | 62115 | 29283882 ~ 29289836 (+) |
| G1971088 | LOC106611192 | non-coding | downstream | 88386 | 29310153 ~ 29310649 (+) |
| G1971091 | LOC100194703 | non-coding | downstream | 92114 | 29313881 ~ 29314303 (+) |
| G1970001 | NA | other | upstream | 807194 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 2132797 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 2565777 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 3387792 | 25831576 ~ 25833321 (+) |
| LOC110505697 | ypel5 | other | upstream | 4429519 | 24788926 ~ 24791594 (+) |
| G1971104 | NA | other | downstream | 252353 | 29474120 ~ 29478383 (+) |
| LOC110505775 | LOC106611224 | other | downstream | 1101746 | 30092455 ~ 30330735 (+) |
| G1972242 | NA | other | downstream | 1408561 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 1415287 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 1437637 | 30659404 ~ 30679995 (+) |
