G1971356


Basic Information

Item Value
gene id G1971356
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29519832 ~ 29520387 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2253706
aaagtgtctgctaaattgtacatgtacaaaaaatatatatatattgcattcTCATGGTGGTGATGAGTCCAACTTTCCCGGAGACTATAGCTGTTGTACAGAGAATGTGATACTCCTGAGCAGCCATATCGCATCACTTAAGGAACGGACTGGTTGTCAACACTTTCTTTCAGCTCTGGAAACCAGCGGGAGTAAACAAACAAGGTCATGAGCACGTCCTTTCTAAAGTTTGTGGTATTATCTCTGCAACCTATATCGTCTATTTTGTTATAGCAAGTTAGTTTGCAAACCACCAATACATCATTTAATATATTTAACGAATAGGTTCTACGAGTAAAAAAAATACCAGCAATAACCAATAATTAAAATAGGCTACATTTGAAAACTGCATGAAAGACAATTATGGCCTAGGCCTGTGTAGCGCCAGTAAGTGAGGACGCATATGCATCCGATTTCATCACAAATCACATTCATCTACTTGATACACCCTGCAAATGCTGCGCCGCATCGTTTGTTTTGTGACGGCTatgttaacatctgctaaccatgtgtatgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2253706 True 556 lncRNA 0.39 1 29519832 29520387

Neighbor

gene id symbol gene type direction distance location
LOC110505761 ankrd9 coding downstream 139293 29378279 ~ 29380539 (-)
znf839 znf839 coding downstream 179911 29334672 ~ 29339921 (-)
si:ch211-266o15.1 LOC106611192 coding downstream 198824 29290704 ~ 29321008 (-)
ptp4a2a LOC106611191 coding downstream 248952 29267052 ~ 29270880 (-)
LOC110505749 NA coding downstream 252957 29220723 ~ 29266875 (-)
LOC110505765 LOC106611200 coding upstream 196215 29716602 ~ 29766891 (-)
LOC118944366 NA coding upstream 317887 29838274 ~ 29857889 (-)
LOC110505769 LOC106611207 coding upstream 397894 29918281 ~ 29937851 (-)
LOC110505770 LOC100380626 coding upstream 421732 29942119 ~ 29979525 (-)
LOC110504221 NA coding upstream 473370 29993757 ~ 29996679 (-)
G1971343 NA non-coding downstream 7975 29511245 ~ 29511857 (-)
G1971302 NA non-coding downstream 64919 29450784 ~ 29454913 (-)
G1971274 NA non-coding downstream 114228 29404980 ~ 29405604 (-)
G1971239 tecpr2 non-coding downstream 169863 29344785 ~ 29349969 (-)
G1971218 NA non-coding downstream 237513 29282086 ~ 29282319 (-)
G1971360 NA non-coding upstream 6417 29526804 ~ 29527109 (-)
G1971366 NA non-coding upstream 10322 29530709 ~ 29530910 (-)
G1971378 NA non-coding upstream 17021 29537408 ~ 29537630 (-)
G1971397 NA non-coding upstream 29929 29550316 ~ 29550624 (-)
G1971466 NA non-coding upstream 75114 29595501 ~ 29595710 (-)
G1970606 NA other downstream 657845 28857940 ~ 28861987 (-)
G1969724 NA other downstream 1376070 28143438 ~ 28143762 (-)
G1969699 LOC100380709 other downstream 1418396 28099921 ~ 28101436 (-)
LOC110505716 LOC106024658 other downstream 2754461 26716542 ~ 26765410 (-)
G1967882 NA other downstream 2981124 26535364 ~ 26538708 (-)
G1971357 LOC106611199 other upstream 2373 29522760 ~ 29525046 (-)
G1972454 NA other upstream 461897 29982284 ~ 29982900 (-)
G1972746 npas3 other upstream 987164 30507551 ~ 30508058 (-)
G1972810 NA other upstream 1096201 30616588 ~ 30683403 (-)
G1972851 NA other upstream 1244569 30764956 ~ 30765933 (-)

Expression


Co-expression Network