Gene
RNA
| Item | Value |
|---|---|
| gene id | G1971535 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29643591 ~ 29643834 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2253885 | True | 244 | lncRNA | 0.41 | 1 | 29643591 | 29643834 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505764 | LOC106611199 | coding | upstream | 118515 | 29522690 ~ 29525076 (+) |
| LOC110505763 | ehd4 | coding | upstream | 191969 | 29408807 ~ 29451622 (+) |
| LOC110505762 | traf3 | coding | upstream | 237984 | 29392556 ~ 29405607 (+) |
| LOC110505760 | rcor1 | coding | upstream | 251493 | 29381713 ~ 29392098 (+) |
| LOC110505758 | tecpr2 | coding | upstream | 265742 | 29342451 ~ 29377849 (+) |
| LOC110505766 | LOC106611201 | coding | downstream | 215814 | 29859648 ~ 29886359 (+) |
| LOC110505767 | LOC106611206 | coding | downstream | 244883 | 29888717 ~ 29906400 (+) |
| LOC110505772 | NA | coding | downstream | 296245 | 29940079 ~ 29941170 (+) |
| LOC110505773 | LOC106611209 | coding | downstream | 363527 | 30007361 ~ 30077294 (+) |
| LOC110505775 | LOC106611224 | coding | downstream | 448621 | 30092455 ~ 30330735 (+) |
| G1971497 | LOC100136012 | non-coding | upstream | 27212 | 29616135 ~ 29616379 (+) |
| G1971495 | NA | non-coding | upstream | 27792 | 29615474 ~ 29615799 (+) |
| G1971438 | NA | non-coding | upstream | 66219 | 29576797 ~ 29577372 (+) |
| G1971432 | NA | non-coding | upstream | 69038 | 29574329 ~ 29574553 (+) |
| G1971394 | NA | non-coding | upstream | 95744 | 29547640 ~ 29547847 (+) |
| G1971538 | NA | non-coding | downstream | 1983 | 29645817 ~ 29646129 (+) |
| G1971541 | NA | non-coding | downstream | 3304 | 29647138 ~ 29647442 (+) |
| G1971628 | NA | non-coding | downstream | 122529 | 29766363 ~ 29780434 (+) |
| G1971652 | NA | non-coding | downstream | 164243 | 29808077 ~ 29846420 (+) |
| G1971840 | NA | non-coding | downstream | 295526 | 29939360 ~ 29939648 (+) |
| G1971104 | NA | other | upstream | 165208 | 29474120 ~ 29478383 (+) |
| G1970001 | NA | other | upstream | 1229672 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 2555275 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 2988255 | 26654905 ~ 26655336 (+) |
| G1967032 | NA | other | upstream | 3810270 | 25831576 ~ 25833321 (+) |
| G1972242 | NA | other | downstream | 986494 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 993220 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 1015570 | 30659404 ~ 30679995 (+) |
| G1972252 | NA | other | downstream | 1051399 | 30695233 ~ 30696314 (+) |
