Gene
RNA
| Item | Value |
|---|---|
| gene id | G1971540 |
| gene name | LOC106579309 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29646767 ~ 29647026 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2253890 | True | 260 | lncRNA | 0.50 | 1 | 29646767 | 29647026 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505761 | ankrd9 | coding | downstream | 266228 | 29378279 ~ 29380539 (-) |
| znf839 | znf839 | coding | downstream | 306846 | 29334672 ~ 29339921 (-) |
| si:ch211-266o15.1 | LOC106611192 | coding | downstream | 325759 | 29290704 ~ 29321008 (-) |
| ptp4a2a | LOC106611191 | coding | downstream | 375887 | 29267052 ~ 29270880 (-) |
| LOC110505749 | NA | coding | downstream | 379892 | 29220723 ~ 29266875 (-) |
| LOC110505765 | LOC106611200 | coding | upstream | 69576 | 29716602 ~ 29766891 (-) |
| LOC118944366 | NA | coding | upstream | 191248 | 29838274 ~ 29857889 (-) |
| LOC110505769 | LOC106611207 | coding | upstream | 271255 | 29918281 ~ 29937851 (-) |
| LOC110505770 | LOC100380626 | coding | upstream | 295093 | 29942119 ~ 29979525 (-) |
| LOC110504221 | NA | coding | upstream | 346731 | 29993757 ~ 29996679 (-) |
| G1971496 | NA | non-coding | downstream | 30975 | 29615569 ~ 29615792 (-) |
| G1971494 | NA | non-coding | downstream | 31311 | 29615051 ~ 29615456 (-) |
| G1971473 | NA | non-coding | downstream | 46709 | 29599841 ~ 29600058 (-) |
| G1971466 | NA | non-coding | downstream | 51057 | 29595501 ~ 29595710 (-) |
| G1971397 | NA | non-coding | downstream | 96143 | 29550316 ~ 29550624 (-) |
| G1971583 | NA | non-coding | upstream | 25098 | 29672124 ~ 29672803 (-) |
| G1971747 | NA | non-coding | upstream | 151140 | 29798166 ~ 29828725 (-) |
| G1971812 | LOC106611206 | non-coding | upstream | 249714 | 29896740 ~ 29906400 (-) |
| G1972448 | NA | non-coding | upstream | 292274 | 29939300 ~ 29939549 (-) |
| G1972450 | NA | non-coding | upstream | 294198 | 29941224 ~ 29941514 (-) |
| G1971357 | LOC106611199 | other | downstream | 121721 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 784780 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 1503005 | 28143438 ~ 28143762 (-) |
| G1969699 | LOC100380709 | other | downstream | 1545331 | 28099921 ~ 28101436 (-) |
| LOC110505716 | LOC106024658 | other | downstream | 2881396 | 26716542 ~ 26765410 (-) |
| G1972454 | NA | other | upstream | 335258 | 29982284 ~ 29982900 (-) |
| G1972746 | npas3 | other | upstream | 860525 | 30507551 ~ 30508058 (-) |
| G1972810 | NA | other | upstream | 969562 | 30616588 ~ 30683403 (-) |
| G1972851 | NA | other | upstream | 1117930 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 1937514 | 31584540 ~ 31585046 (-) |
