G1971583


Basic Information

Item Value
gene id G1971583
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 29672124 ~ 29672803 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2253942
tagtagaatctatatacacatttcacacatctcatcaaatacagtaggagagtctataaacacatttcacacatctactcaaatacagtagtagagtctataaacccATGTCATACACCTCATCAAATACATTAGTAGAGTCTattaacacatttcacacatctcatcaaatagagtagtagtctataaacacatttcatacatctcatcaaatacagtagtagagtctgtaaacacatttcacacatctcatcaaatacagtagtagtctataaacacatttcatacatctcatcaaatacagtaggagactctaaacacatttcacacatctcatcaaatacagtagtacagtctatatacacatttcatacatctcatcaaatacagtaggagagcctatatacacatttcatacatctcatcaaatacagtaggagactctaaacacatttcacacatctcatcaaatacagtagtagagtctatatacacatttcatacatctcatgaaatacagtagtagagtctatatacacatttcacacatctcatcaaatacagtagtagagtctatatacacatttcatac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2253942 True 592 lncRNA 0.32 2 29672124 29672803

Neighbor

gene id symbol gene type direction distance location
LOC110505761 ankrd9 coding downstream 291585 29378279 ~ 29380539 (-)
znf839 znf839 coding downstream 332203 29334672 ~ 29339921 (-)
si:ch211-266o15.1 LOC106611192 coding downstream 351116 29290704 ~ 29321008 (-)
ptp4a2a LOC106611191 coding downstream 401244 29267052 ~ 29270880 (-)
LOC110505749 NA coding downstream 405249 29220723 ~ 29266875 (-)
LOC110505765 LOC106611200 coding upstream 43799 29716602 ~ 29766891 (-)
LOC118944366 NA coding upstream 165471 29838274 ~ 29857889 (-)
LOC110505769 LOC106611207 coding upstream 245478 29918281 ~ 29937851 (-)
LOC110505770 LOC100380626 coding upstream 269316 29942119 ~ 29979525 (-)
LOC110504221 NA coding upstream 320954 29993757 ~ 29996679 (-)
G1971540 LOC106579309 non-coding downstream 25098 29646767 ~ 29647026 (-)
G1971496 NA non-coding downstream 56332 29615569 ~ 29615792 (-)
G1971494 NA non-coding downstream 56668 29615051 ~ 29615456 (-)
G1971473 NA non-coding downstream 72066 29599841 ~ 29600058 (-)
G1971466 NA non-coding downstream 76414 29595501 ~ 29595710 (-)
G1971747 NA non-coding upstream 125363 29798166 ~ 29828725 (-)
G1971812 LOC106611206 non-coding upstream 223937 29896740 ~ 29906400 (-)
G1972448 NA non-coding upstream 266497 29939300 ~ 29939549 (-)
G1972450 NA non-coding upstream 268421 29941224 ~ 29941514 (-)
G1972491 LOC106611209 non-coding upstream 402716 30075519 ~ 30077670 (-)
G1971357 LOC106611199 other downstream 147078 29522760 ~ 29525046 (-)
G1970606 NA other downstream 810137 28857940 ~ 28861987 (-)
G1969724 NA other downstream 1528362 28143438 ~ 28143762 (-)
G1969699 LOC100380709 other downstream 1570688 28099921 ~ 28101436 (-)
LOC110505716 LOC106024658 other downstream 2906753 26716542 ~ 26765410 (-)
G1972454 NA other upstream 309481 29982284 ~ 29982900 (-)
G1972746 npas3 other upstream 834748 30507551 ~ 30508058 (-)
G1972810 NA other upstream 943785 30616588 ~ 30683403 (-)
G1972851 NA other upstream 1092153 30764956 ~ 30765933 (-)
G1973793 NA other upstream 1911737 31584540 ~ 31585046 (-)

Expression


Co-expression Network