Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972454 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 29982284 ~ 29982900 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| HEAT repeat-containing protein 5A isoform X1 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2254903 | True | 461 | TUCP | 0.56 | 2 | 29982284 | 29982900 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505770 | LOC100380626 | coding | downstream | 2759 | 29942119 ~ 29979525 (-) |
| LOC110505769 | LOC106611207 | coding | downstream | 44433 | 29918281 ~ 29937851 (-) |
| LOC118944366 | NA | coding | downstream | 124395 | 29838274 ~ 29857889 (-) |
| LOC110505765 | LOC106611200 | coding | downstream | 215393 | 29716602 ~ 29766891 (-) |
| LOC110505761 | ankrd9 | coding | downstream | 601745 | 29378279 ~ 29380539 (-) |
| LOC110504221 | NA | coding | upstream | 10857 | 29993757 ~ 29996679 (-) |
| LOC110505778 | LOC106611226 | coding | upstream | 874150 | 30857050 ~ 30872023 (-) |
| sptssa | NA | coding | upstream | 892494 | 30875080 ~ 30880165 (-) |
| LOC110505780 | eapp | coding | upstream | 897734 | 30880634 ~ 30891858 (-) |
| LOC110505779 | snx6 | coding | upstream | 909090 | 30891990 ~ 30899754 (-) |
| G1972450 | NA | non-coding | downstream | 40770 | 29941224 ~ 29941514 (-) |
| G1972448 | NA | non-coding | downstream | 42735 | 29939300 ~ 29939549 (-) |
| G1971812 | LOC106611206 | non-coding | downstream | 75884 | 29896740 ~ 29906400 (-) |
| G1971747 | NA | non-coding | downstream | 153559 | 29798166 ~ 29828725 (-) |
| G1971583 | NA | non-coding | downstream | 309481 | 29672124 ~ 29672803 (-) |
| G1972491 | LOC106611209 | non-coding | upstream | 92619 | 30075519 ~ 30077670 (-) |
| G1972520 | LOC106562530 | non-coding | upstream | 141788 | 30124688 ~ 30129288 (-) |
| G1972552 | NA | non-coding | upstream | 187119 | 30170019 ~ 30170241 (-) |
| G1972554 | NA | non-coding | upstream | 188333 | 30171233 ~ 30174260 (-) |
| G1972553 | NA | non-coding | upstream | 189577 | 30172477 ~ 30177859 (-) |
| G1971357 | LOC106611199 | other | downstream | 457238 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 1120297 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 1838522 | 28143438 ~ 28143762 (-) |
| G1969699 | LOC100380709 | other | downstream | 1880848 | 28099921 ~ 28101436 (-) |
| LOC110505716 | LOC106024658 | other | downstream | 3216913 | 26716542 ~ 26765410 (-) |
| G1972746 | npas3 | other | upstream | 524651 | 30507551 ~ 30508058 (-) |
| G1972810 | NA | other | upstream | 633688 | 30616588 ~ 30683403 (-) |
| G1972851 | NA | other | upstream | 782056 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 1601640 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 1631521 | 31614421 ~ 31618499 (-) |
