G1971986


Basic Information

Item Value
gene id G1971986
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30209193 ~ 30209559 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254385
ctctacaaccctgggcctgaagtaacagtggatgagcaactggttccattcagagTATATGCCCAGCAAGCCAGCAAAGTATGGCATCAAAATATGGGTGGCCTGTGATGCACAATCCAGCTACActtggaagatgcaagtctacacaGGGAAGCCGACCAGTGGAGGCGCAGAGAAGAAGCAGTGGATGTGGGTTGTGATTTATATGACAGATGGACTCAGGGGGCACAATGCCACATGTGACAATTACTTCACCTcttatg

Function

NR:

description
PREDICTED: uncharacterized protein LOC106523013

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254385 True 263 lncRNA 0.49 2 30209193 30209559

Neighbor

gene id symbol gene type direction distance location
LOC110505773 LOC106611209 coding upstream 131899 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 268023 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 302793 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 322834 29859648 ~ 29886359 (+)
LOC110505764 LOC106611199 coding upstream 684117 29522690 ~ 29525076 (+)
LOC110505776 LOC106611225 coding downstream 126976 30336535 ~ 30846679 (+)
LOC110505785 LOC106611232 coding downstream 782740 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 790957 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 871120 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 893725 31103284 ~ 31109026 (+)
G1971961 NA non-coding upstream 29749 30170668 ~ 30179444 (+)
G1971918 NA non-coding upstream 96615 30104560 ~ 30112578 (+)
G1971900 NA non-coding upstream 123150 30084524 ~ 30086043 (+)
G1971858 NA non-coding upstream 130679 30078119 ~ 30078514 (+)
G1971889 NA non-coding upstream 177386 30029278 ~ 30031807 (+)
G1972048 NA non-coding downstream 93937 30303496 ~ 30304726 (+)
G1972092 NA non-coding downstream 179200 30388759 ~ 30389010 (+)
G1972094 NA non-coding downstream 181339 30390898 ~ 30391174 (+)
G1972114 NA non-coding downstream 208419 30417978 ~ 30418310 (+)
G1972116 NA non-coding downstream 212968 30422527 ~ 30423680 (+)
G1971104 NA other upstream 730810 29474120 ~ 29478383 (+)
G1970001 NA other upstream 1795274 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3120877 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3553857 26654905 ~ 26655336 (+)
G1967032 NA other upstream 4375872 25831576 ~ 25833321 (+)
LOC110505775 LOC106611224 other downstream 113954 30092455 ~ 30330735 (+)
G1972242 NA other downstream 420769 30630328 ~ 30632667 (+)
G1972244 NA other downstream 427495 30637054 ~ 30655039 (+)
G1972245 NA other downstream 449845 30659404 ~ 30679995 (+)
G1972252 NA other downstream 485674 30695233 ~ 30696314 (+)

Expression


Co-expression Network