G1972129


Basic Information

Item Value
gene id G1972129
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30441299 ~ 30441520 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254542
tctctgcagatcctctcaagctctgtcaggttggatggggagcgtcgctgcacagctattttcaggtctctccagagatctttgctcgggttcaagtccgggctctggctgggccactcaaggacattcagagacttgtcccgaagccactcctgcattgtcttggctgtttgcttagggtcattgtcctgttggaaggtgagccttTGCGCCAGCCTGAAG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254542 True 222 lncRNA 0.55 1 30441299 30441520

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 110564 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 364005 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 500129 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 534899 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 554940 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 550779 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 558996 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 639159 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 661764 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 773303 31214823 ~ 31220599 (+)
G1972127 NA non-coding upstream 3470 30437618 ~ 30437829 (+)
G1972124 NA non-coding upstream 5376 30435710 ~ 30435923 (+)
G1972122 NA non-coding upstream 8153 30432889 ~ 30433146 (+)
G1972116 NA non-coding upstream 17619 30422527 ~ 30423680 (+)
G1972114 NA non-coding upstream 22989 30417978 ~ 30418310 (+)
G1972136 NA non-coding downstream 9589 30451109 ~ 30451582 (+)
G1972137 NA non-coding downstream 10847 30452367 ~ 30452792 (+)
G1972142 NA non-coding downstream 18818 30460338 ~ 30460673 (+)
G1972143 NA non-coding downstream 19680 30461200 ~ 30461500 (+)
G1972153 NA non-coding downstream 45938 30487458 ~ 30487673 (+)
G1971104 NA other upstream 962916 29474120 ~ 29478383 (+)
G1970001 NA other upstream 2027380 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3352983 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3785963 26654905 ~ 26655336 (+)
G1972242 NA other downstream 188808 30630328 ~ 30632667 (+)
G1972244 NA other downstream 195534 30637054 ~ 30655039 (+)
G1972245 NA other downstream 217884 30659404 ~ 30679995 (+)
G1972252 NA other downstream 253713 30695233 ~ 30696314 (+)
G1973126 NA other downstream 715998 31157518 ~ 31157736 (+)

Expression


Co-expression Network