G1972142


Basic Information

Item Value
gene id G1972142
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30460338 ~ 30460673 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254556
GTCTAACTGACTGACATCCTTATGATAAGAACACTTGAGAAATGATGTCACCACGGTGCCTTTGtcttctaaatcaaatcaaatcaaatcaaattgtatttgtcacatacacatggttagcagatgttaatgtgagtgtagcgaaatgcttgtgcttctagttccgacaatgcagtaataatcaacaagtaatctagctaacaattccacaactactaccttatacacaaaagtgtaaggggataaagaatatgtacataaagatatgtgaatgagtgatggtacagaacggcataggcaagatgcagtagatggtattgagtacagtatgtacat

Function

NR:

description
LOW QUALITY PROTEIN: transcription and mRNA export factor ENY2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254556 True 336 lncRNA 0.36 1 30460338 30460673

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 129603 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 383044 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 519168 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 553938 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 573979 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 531626 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 539843 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 620006 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 642611 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 754150 31214823 ~ 31220599 (+)
G1972137 NA non-coding upstream 7546 30452367 ~ 30452792 (+)
G1972136 NA non-coding upstream 8756 30451109 ~ 30451582 (+)
G1972129 NA non-coding upstream 18818 30441299 ~ 30441520 (+)
G1972127 NA non-coding upstream 22509 30437618 ~ 30437829 (+)
G1972124 NA non-coding upstream 24415 30435710 ~ 30435923 (+)
G1972143 NA non-coding downstream 527 30461200 ~ 30461500 (+)
G1972153 NA non-coding downstream 26785 30487458 ~ 30487673 (+)
G1972155 NA non-coding downstream 29142 30489815 ~ 30490160 (+)
G1972156 NA non-coding downstream 29526 30490199 ~ 30490409 (+)
G1972161 NA non-coding downstream 34310 30494983 ~ 30495547 (+)
G1971104 NA other upstream 981955 29474120 ~ 29478383 (+)
G1970001 NA other upstream 2046419 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3372022 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3805002 26654905 ~ 26655336 (+)
G1972242 NA other downstream 169655 30630328 ~ 30632667 (+)
G1972244 NA other downstream 176381 30637054 ~ 30655039 (+)
G1972245 NA other downstream 198731 30659404 ~ 30679995 (+)
G1972252 NA other downstream 234560 30695233 ~ 30696314 (+)
G1973126 NA other downstream 696845 31157518 ~ 31157736 (+)

Expression


Co-expression Network