G1972156


Basic Information

Item Value
gene id G1972156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30490199 ~ 30490409 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254570
aaaaatacagatttccgattgttctGAAAagttgaaattggccctaattaatcgaccaCTACACCAGATCACTGCAGACAACCAGGATCCAGAAGACAACCTTCTGATACCAGCAATTCTCCTCACTTTTCACCATAAACCATGGGATTCAAACTGGCAACTCTTCGGTTACTGGCTCGCCTCTCTAACCTCAAGGCCTGCCTCTCTAACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254570 True 211 lncRNA 0.45 1 30490199 30490409

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 159464 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 412905 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 549029 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 583799 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 603840 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 501890 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 510107 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 590270 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 612875 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 724414 31214823 ~ 31220599 (+)
G1972155 NA non-coding upstream 39 30489815 ~ 30490160 (+)
G1972153 NA non-coding upstream 2526 30487458 ~ 30487673 (+)
G1972143 NA non-coding upstream 28699 30461200 ~ 30461500 (+)
G1972142 NA non-coding upstream 29526 30460338 ~ 30460673 (+)
G1972137 NA non-coding upstream 37407 30452367 ~ 30452792 (+)
G1972161 NA non-coding downstream 4574 30494983 ~ 30495547 (+)
G1972163 NA non-coding downstream 7423 30497832 ~ 30498070 (+)
G1972164 NA non-coding downstream 9136 30499545 ~ 30499876 (+)
G1972175 NA non-coding downstream 24261 30514670 ~ 30514873 (+)
G1972177 NA non-coding downstream 25803 30516212 ~ 30516429 (+)
G1971104 NA other upstream 1011816 29474120 ~ 29478383 (+)
G1970001 NA other upstream 2076280 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3401883 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3834863 26654905 ~ 26655336 (+)
G1972242 NA other downstream 139919 30630328 ~ 30632667 (+)
G1972244 NA other downstream 146645 30637054 ~ 30655039 (+)
G1972245 NA other downstream 168995 30659404 ~ 30679995 (+)
G1972252 NA other downstream 204824 30695233 ~ 30696314 (+)
G1973126 NA other downstream 667109 31157518 ~ 31157736 (+)

Expression


Co-expression Network