Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972164 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 30499545 ~ 30499876 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2254578 | True | 332 | lncRNA | 0.48 | 1 | 30499545 | 30499876 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110505775 | LOC106611224 | coding | upstream | 168810 | 30092455 ~ 30330735 (+) |
| LOC110505773 | LOC106611209 | coding | upstream | 422251 | 30007361 ~ 30077294 (+) |
| LOC110505772 | NA | coding | upstream | 558375 | 29940079 ~ 29941170 (+) |
| LOC110505767 | LOC106611206 | coding | upstream | 593145 | 29888717 ~ 29906400 (+) |
| LOC110505766 | LOC106611201 | coding | upstream | 613186 | 29859648 ~ 29886359 (+) |
| LOC110505785 | LOC106611232 | coding | downstream | 492423 | 30992299 ~ 31000393 (+) |
| LOC110505784 | LOC106611231 | coding | downstream | 500640 | 31000516 ~ 31040820 (+) |
| LOC118944303 | LOC106611235 | coding | downstream | 580803 | 31080679 ~ 31082541 (+) |
| LOC110505788 | LOC106611236 | coding | downstream | 603408 | 31103284 ~ 31109026 (+) |
| LOC110505789 | LOC106611239 | coding | downstream | 714947 | 31214823 ~ 31220599 (+) |
| G1972163 | NA | non-coding | upstream | 1475 | 30497832 ~ 30498070 (+) |
| G1972161 | NA | non-coding | upstream | 3998 | 30494983 ~ 30495547 (+) |
| G1972156 | NA | non-coding | upstream | 9136 | 30490199 ~ 30490409 (+) |
| G1972155 | NA | non-coding | upstream | 9385 | 30489815 ~ 30490160 (+) |
| G1972153 | NA | non-coding | upstream | 11872 | 30487458 ~ 30487673 (+) |
| G1972175 | NA | non-coding | downstream | 14794 | 30514670 ~ 30514873 (+) |
| G1972177 | NA | non-coding | downstream | 16336 | 30516212 ~ 30516429 (+) |
| G1972179 | NA | non-coding | downstream | 17153 | 30517029 ~ 30517245 (+) |
| G1972182 | NA | non-coding | downstream | 23449 | 30523325 ~ 30523621 (+) |
| G1972211 | NA | non-coding | downstream | 84390 | 30584266 ~ 30584483 (+) |
| G1971104 | NA | other | upstream | 1021162 | 29474120 ~ 29478383 (+) |
| G1970001 | NA | other | upstream | 2085626 | 28413600 ~ 28413919 (+) |
| LOC110505721 | ccdc88c | other | upstream | 3411229 | 26988390 ~ 27099710 (+) |
| G1967965 | NA | other | upstream | 3844209 | 26654905 ~ 26655336 (+) |
| G1972242 | NA | other | downstream | 130452 | 30630328 ~ 30632667 (+) |
| G1972244 | NA | other | downstream | 137178 | 30637054 ~ 30655039 (+) |
| G1972245 | NA | other | downstream | 159528 | 30659404 ~ 30679995 (+) |
| G1972252 | NA | other | downstream | 195357 | 30695233 ~ 30696314 (+) |
| G1973126 | NA | other | downstream | 657642 | 31157518 ~ 31157736 (+) |
