G1972177


Basic Information

Item Value
gene id G1972177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30516212 ~ 30516429 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254591
tttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttctcaatactttgttatataccctttgttggcaatgacagaggtcaaacgttttctgtaagtcttttcacacactgttgctggtattttggcccattcctccatgctgatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaactccctc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254591 True 218 lncRNA 0.41 1 30516212 30516429

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 185477 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 438918 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 575042 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 609812 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 629853 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 475870 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 484087 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 564250 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 586855 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 698394 31214823 ~ 31220599 (+)
G1972175 NA non-coding upstream 1339 30514670 ~ 30514873 (+)
G1972164 NA non-coding upstream 16336 30499545 ~ 30499876 (+)
G1972163 NA non-coding upstream 18142 30497832 ~ 30498070 (+)
G1972161 NA non-coding upstream 20665 30494983 ~ 30495547 (+)
G1972156 NA non-coding upstream 25803 30490199 ~ 30490409 (+)
G1972179 NA non-coding downstream 600 30517029 ~ 30517245 (+)
G1972182 NA non-coding downstream 6896 30523325 ~ 30523621 (+)
G1972211 NA non-coding downstream 67837 30584266 ~ 30584483 (+)
G1972215 NA non-coding downstream 70985 30587414 ~ 30587712 (+)
G1972227 NA non-coding downstream 88682 30605111 ~ 30605352 (+)
G1971104 NA other upstream 1037829 29474120 ~ 29478383 (+)
G1970001 NA other upstream 2102293 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3427896 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3860876 26654905 ~ 26655336 (+)
G1972242 NA other downstream 113899 30630328 ~ 30632667 (+)
G1972244 NA other downstream 120625 30637054 ~ 30655039 (+)
G1972245 NA other downstream 142975 30659404 ~ 30679995 (+)
G1972252 NA other downstream 178804 30695233 ~ 30696314 (+)
G1973126 NA other downstream 641089 31157518 ~ 31157736 (+)

Expression


Co-expression Network