Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972794 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 30581107 ~ 30581336 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2255282 | True | 230 | lncRNA | 0.39 | 1 | 30581107 | 30581336 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504221 | NA | coding | downstream | 584428 | 29993757 ~ 29996679 (-) |
| LOC110505770 | LOC100380626 | coding | downstream | 601582 | 29942119 ~ 29979525 (-) |
| LOC110505769 | LOC106611207 | coding | downstream | 643256 | 29918281 ~ 29937851 (-) |
| LOC118944366 | NA | coding | downstream | 723218 | 29838274 ~ 29857889 (-) |
| LOC110505765 | LOC106611200 | coding | downstream | 814216 | 29716602 ~ 29766891 (-) |
| LOC110505778 | LOC106611226 | coding | upstream | 275714 | 30857050 ~ 30872023 (-) |
| sptssa | NA | coding | upstream | 294058 | 30875080 ~ 30880165 (-) |
| LOC110505780 | eapp | coding | upstream | 299298 | 30880634 ~ 30891858 (-) |
| LOC110505779 | snx6 | coding | upstream | 310654 | 30891990 ~ 30899754 (-) |
| LOC110505781 | cf12 | coding | upstream | 327639 | 30908975 ~ 30912793 (-) |
| G1972793 | NA | non-coding | downstream | 205 | 30580629 ~ 30580902 (-) |
| G1972792 | NA | non-coding | downstream | 543 | 30580301 ~ 30580564 (-) |
| G1972790 | NA | non-coding | downstream | 2912 | 30577937 ~ 30578195 (-) |
| G1972752 | NA | non-coding | downstream | 61017 | 30519887 ~ 30520090 (-) |
| G1972750 | NA | non-coding | downstream | 66165 | 30514726 ~ 30514942 (-) |
| G1972797 | NA | non-coding | upstream | 2407 | 30583743 ~ 30583955 (-) |
| G1972798 | NA | non-coding | upstream | 5696 | 30587032 ~ 30587501 (-) |
| G1972799 | NA | non-coding | upstream | 14990 | 30596326 ~ 30596565 (-) |
| G1972807 | NA | non-coding | upstream | 31687 | 30613023 ~ 30613222 (-) |
| G1972810 | NA | non-coding | upstream | 36030 | 30616588 ~ 30683403 (-) |
| G1972746 | npas3 | other | downstream | 73049 | 30507551 ~ 30508058 (-) |
| G1972454 | NA | other | downstream | 598207 | 29982284 ~ 29982900 (-) |
| G1971357 | LOC106611199 | other | downstream | 1056061 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 1719120 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 2437345 | 28143438 ~ 28143762 (-) |
| G1972851 | NA | other | upstream | 183620 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 1003204 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 1033085 | 31614421 ~ 31618499 (-) |
| G1974000 | NA | other | upstream | 1405107 | 31986443 ~ 31986884 (-) |
