Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972797 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 30583743 ~ 30583955 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2255285 | True | 213 | lncRNA | 0.45 | 1 | 30583743 | 30583955 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504221 | NA | coding | downstream | 587064 | 29993757 ~ 29996679 (-) |
| LOC110505770 | LOC100380626 | coding | downstream | 604218 | 29942119 ~ 29979525 (-) |
| LOC110505769 | LOC106611207 | coding | downstream | 645892 | 29918281 ~ 29937851 (-) |
| LOC118944366 | NA | coding | downstream | 725854 | 29838274 ~ 29857889 (-) |
| LOC110505765 | LOC106611200 | coding | downstream | 816852 | 29716602 ~ 29766891 (-) |
| LOC110505778 | LOC106611226 | coding | upstream | 273095 | 30857050 ~ 30872023 (-) |
| sptssa | NA | coding | upstream | 291439 | 30875080 ~ 30880165 (-) |
| LOC110505780 | eapp | coding | upstream | 296679 | 30880634 ~ 30891858 (-) |
| LOC110505779 | snx6 | coding | upstream | 308035 | 30891990 ~ 30899754 (-) |
| LOC110505781 | cf12 | coding | upstream | 325020 | 30908975 ~ 30912793 (-) |
| G1972794 | NA | non-coding | downstream | 2407 | 30581107 ~ 30581336 (-) |
| G1972793 | NA | non-coding | downstream | 2841 | 30580629 ~ 30580902 (-) |
| G1972792 | NA | non-coding | downstream | 3179 | 30580301 ~ 30580564 (-) |
| G1972790 | NA | non-coding | downstream | 5548 | 30577937 ~ 30578195 (-) |
| G1972752 | NA | non-coding | downstream | 63653 | 30519887 ~ 30520090 (-) |
| G1972798 | NA | non-coding | upstream | 3077 | 30587032 ~ 30587501 (-) |
| G1972799 | NA | non-coding | upstream | 12371 | 30596326 ~ 30596565 (-) |
| G1972807 | NA | non-coding | upstream | 29068 | 30613023 ~ 30613222 (-) |
| G1972810 | NA | non-coding | upstream | 33411 | 30616588 ~ 30683403 (-) |
| G1972811 | NA | non-coding | upstream | 36535 | 30620490 ~ 30663242 (-) |
| G1972746 | npas3 | other | downstream | 75685 | 30507551 ~ 30508058 (-) |
| G1972454 | NA | other | downstream | 600843 | 29982284 ~ 29982900 (-) |
| G1971357 | LOC106611199 | other | downstream | 1058697 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 1721756 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 2439981 | 28143438 ~ 28143762 (-) |
| G1972851 | NA | other | upstream | 181001 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 1000585 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 1030466 | 31614421 ~ 31618499 (-) |
| G1974000 | NA | other | upstream | 1402488 | 31986443 ~ 31986884 (-) |
