Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972798 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 30587032 ~ 30587501 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2255286 | True | 470 | lncRNA | 0.34 | 1 | 30587032 | 30587501 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504221 | NA | coding | downstream | 590353 | 29993757 ~ 29996679 (-) |
| LOC110505770 | LOC100380626 | coding | downstream | 607507 | 29942119 ~ 29979525 (-) |
| LOC110505769 | LOC106611207 | coding | downstream | 649181 | 29918281 ~ 29937851 (-) |
| LOC118944366 | NA | coding | downstream | 729143 | 29838274 ~ 29857889 (-) |
| LOC110505765 | LOC106611200 | coding | downstream | 820141 | 29716602 ~ 29766891 (-) |
| LOC110505778 | LOC106611226 | coding | upstream | 269549 | 30857050 ~ 30872023 (-) |
| sptssa | NA | coding | upstream | 287893 | 30875080 ~ 30880165 (-) |
| LOC110505780 | eapp | coding | upstream | 293133 | 30880634 ~ 30891858 (-) |
| LOC110505779 | snx6 | coding | upstream | 304489 | 30891990 ~ 30899754 (-) |
| LOC110505781 | cf12 | coding | upstream | 321474 | 30908975 ~ 30912793 (-) |
| G1972797 | NA | non-coding | downstream | 3077 | 30583743 ~ 30583955 (-) |
| G1972794 | NA | non-coding | downstream | 5696 | 30581107 ~ 30581336 (-) |
| G1972793 | NA | non-coding | downstream | 6130 | 30580629 ~ 30580902 (-) |
| G1972792 | NA | non-coding | downstream | 6468 | 30580301 ~ 30580564 (-) |
| G1972790 | NA | non-coding | downstream | 8837 | 30577937 ~ 30578195 (-) |
| G1972799 | NA | non-coding | upstream | 8825 | 30596326 ~ 30596565 (-) |
| G1972807 | NA | non-coding | upstream | 25522 | 30613023 ~ 30613222 (-) |
| G1972810 | NA | non-coding | upstream | 29865 | 30616588 ~ 30683403 (-) |
| G1972811 | NA | non-coding | upstream | 32989 | 30620490 ~ 30663242 (-) |
| G1972813 | NA | non-coding | upstream | 99361 | 30686862 ~ 30687083 (-) |
| G1972746 | npas3 | other | downstream | 78974 | 30507551 ~ 30508058 (-) |
| G1972454 | NA | other | downstream | 604132 | 29982284 ~ 29982900 (-) |
| G1971357 | LOC106611199 | other | downstream | 1061986 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 1725045 | 28857940 ~ 28861987 (-) |
| G1969724 | NA | other | downstream | 2443270 | 28143438 ~ 28143762 (-) |
| G1972851 | NA | other | upstream | 177455 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 997039 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 1026920 | 31614421 ~ 31618499 (-) |
| G1974000 | NA | other | upstream | 1398942 | 31986443 ~ 31986884 (-) |
