G1972227


Basic Information

Item Value
gene id G1972227
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30605111 ~ 30605352 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254644
ATTGATGATGATAGACTGTAGCTAAGTGTTTTATGTTTTATAAATGTAATGTCGTACTACACACTTGATTAAATGTACAACATACACTTTGGAAGGGGAGATTCTGTATGTATGGTCAAATCCTTGCCATTCATCAGTGTGTTTGTACGCTTCGACCTTGTCAAACCCTGtacctagtctactctactctactctactgtatgtcAGACATGTTGGATGCGCCGCAGCCATTTCACTTCACC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254644 True 242 lncRNA 0.40 1 30605111 30605352

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 274376 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 527817 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 663941 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 698711 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 718752 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 386947 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 395164 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 475327 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 497932 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 609471 31214823 ~ 31220599 (+)
G1972215 NA non-coding upstream 17399 30587414 ~ 30587712 (+)
G1972211 NA non-coding upstream 20628 30584266 ~ 30584483 (+)
G1972182 NA non-coding upstream 81490 30523325 ~ 30523621 (+)
G1972179 NA non-coding upstream 87866 30517029 ~ 30517245 (+)
G1972177 NA non-coding upstream 88682 30516212 ~ 30516429 (+)
G1972230 NA non-coding downstream 2488 30607840 ~ 30608646 (+)
G1972236 NA non-coding downstream 8308 30613660 ~ 30613977 (+)
G1972249 NA non-coding downstream 85166 30690518 ~ 30690802 (+)
G1972266 NA non-coding downstream 107242 30712594 ~ 30712849 (+)
G1972270 NA non-coding downstream 118350 30723702 ~ 30723990 (+)
G1971104 NA other upstream 1126728 29474120 ~ 29478383 (+)
G1970001 NA other upstream 2191192 28413600 ~ 28413919 (+)
LOC110505721 ccdc88c other upstream 3516795 26988390 ~ 27099710 (+)
G1967965 NA other upstream 3949775 26654905 ~ 26655336 (+)
G1972242 NA other downstream 24976 30630328 ~ 30632667 (+)
G1972244 NA other downstream 31702 30637054 ~ 30655039 (+)
G1972245 NA other downstream 54052 30659404 ~ 30679995 (+)
G1972252 NA other downstream 89881 30695233 ~ 30696314 (+)
G1973126 NA other downstream 552166 31157518 ~ 31157736 (+)

Expression


Co-expression Network