Gene
RNA
| Item | Value |
|---|---|
| gene id | G1972813 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048589.1 |
| NCBI id | CM023243.3 |
| chromosome length | 47542702 |
| location | 30686862 ~ 30687083 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2255337 | True | 222 | lncRNA | 0.44 | 1 | 30686862 | 30687083 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110504221 | NA | coding | downstream | 690183 | 29993757 ~ 29996679 (-) |
| LOC110505770 | LOC100380626 | coding | downstream | 707337 | 29942119 ~ 29979525 (-) |
| LOC110505769 | LOC106611207 | coding | downstream | 749011 | 29918281 ~ 29937851 (-) |
| LOC118944366 | NA | coding | downstream | 828973 | 29838274 ~ 29857889 (-) |
| LOC110505765 | LOC106611200 | coding | downstream | 919971 | 29716602 ~ 29766891 (-) |
| LOC110505778 | LOC106611226 | coding | upstream | 169967 | 30857050 ~ 30872023 (-) |
| sptssa | NA | coding | upstream | 188311 | 30875080 ~ 30880165 (-) |
| LOC110505780 | eapp | coding | upstream | 193551 | 30880634 ~ 30891858 (-) |
| LOC110505779 | snx6 | coding | upstream | 204907 | 30891990 ~ 30899754 (-) |
| LOC110505781 | cf12 | coding | upstream | 221892 | 30908975 ~ 30912793 (-) |
| G1972810 | NA | non-coding | downstream | 3459 | 30616588 ~ 30683403 (-) |
| G1972811 | NA | non-coding | downstream | 23620 | 30620490 ~ 30663242 (-) |
| G1972807 | NA | non-coding | downstream | 73640 | 30613023 ~ 30613222 (-) |
| G1972799 | NA | non-coding | downstream | 90297 | 30596326 ~ 30596565 (-) |
| G1972798 | NA | non-coding | downstream | 99361 | 30587032 ~ 30587501 (-) |
| G1972814 | NA | non-coding | upstream | 3732 | 30690815 ~ 30691131 (-) |
| G1972817 | NA | non-coding | upstream | 9506 | 30696589 ~ 30696915 (-) |
| G1972818 | NA | non-coding | upstream | 15123 | 30702206 ~ 30703547 (-) |
| G1972824 | NA | non-coding | upstream | 32391 | 30719474 ~ 30719679 (-) |
| G1972825 | NA | non-coding | upstream | 33905 | 30720988 ~ 30721254 (-) |
| G1972746 | npas3 | other | downstream | 178804 | 30507551 ~ 30508058 (-) |
| G1972454 | NA | other | downstream | 703962 | 29982284 ~ 29982900 (-) |
| G1971357 | LOC106611199 | other | downstream | 1161816 | 29522760 ~ 29525046 (-) |
| G1970606 | NA | other | downstream | 1824875 | 28857940 ~ 28861987 (-) |
| G1972851 | NA | other | upstream | 77873 | 30764956 ~ 30765933 (-) |
| G1973793 | NA | other | upstream | 897457 | 31584540 ~ 31585046 (-) |
| G1973835 | LOC106611243 | other | upstream | 927338 | 31614421 ~ 31618499 (-) |
| G1974000 | NA | other | upstream | 1299360 | 31986443 ~ 31986884 (-) |
| G1975453 | NA | other | upstream | 2632646 | 33319729 ~ 33324325 (-) |
