G1972249


Basic Information

Item Value
gene id G1972249
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048589.1
NCBI id CM023243.3
chromosome length 47542702
location 30690518 ~ 30690802 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2254667
GCTTGGTGTGGAATGGATCAATATACTGAATAGACCCTACCAGCATCCTGGCATTTTAGTAGACTTTGCAGGGGGAGAACACACATCATATGGATATGGACTGGAATGGACTACTATCATGATGATATGTTTGAAGTGCTGTACGTTTTATTATCTTTGTTTGTGCCAACTTGGGTTTGCTTACTGTTGTTTTCCTGCTTTCACACACTGTTCATTTCTACTGTCATCATGAGAGCTAATACCTTCCACATGAGGAGGTGTAATTTTGAtttgcagacagacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2254667 True 285 lncRNA 0.41 1 30690518 30690802

Neighbor

gene id symbol gene type direction distance location
LOC110505775 LOC106611224 coding upstream 359783 30092455 ~ 30330735 (+)
LOC110505773 LOC106611209 coding upstream 613224 30007361 ~ 30077294 (+)
LOC110505772 NA coding upstream 749348 29940079 ~ 29941170 (+)
LOC110505767 LOC106611206 coding upstream 784118 29888717 ~ 29906400 (+)
LOC110505766 LOC106611201 coding upstream 804159 29859648 ~ 29886359 (+)
LOC110505785 LOC106611232 coding downstream 301497 30992299 ~ 31000393 (+)
LOC110505784 LOC106611231 coding downstream 309714 31000516 ~ 31040820 (+)
LOC118944303 LOC106611235 coding downstream 389877 31080679 ~ 31082541 (+)
LOC110505788 LOC106611236 coding downstream 412482 31103284 ~ 31109026 (+)
LOC110505789 LOC106611239 coding downstream 524021 31214823 ~ 31220599 (+)
G1972236 NA non-coding upstream 76541 30613660 ~ 30613977 (+)
G1972230 NA non-coding upstream 81872 30607840 ~ 30608646 (+)
G1972227 NA non-coding upstream 85166 30605111 ~ 30605352 (+)
G1972215 NA non-coding upstream 102806 30587414 ~ 30587712 (+)
G1972211 NA non-coding upstream 106035 30584266 ~ 30584483 (+)
G1972266 NA non-coding downstream 21792 30712594 ~ 30712849 (+)
G1972270 NA non-coding downstream 32900 30723702 ~ 30723990 (+)
G1972272 NA non-coding downstream 33978 30724780 ~ 30724981 (+)
G1972287 NA non-coding downstream 62530 30753332 ~ 30753610 (+)
G1972294 NA non-coding downstream 69928 30760730 ~ 30760992 (+)
G1972245 NA other upstream 10523 30659404 ~ 30679995 (+)
G1972244 NA other upstream 35479 30637054 ~ 30655039 (+)
G1972242 NA other upstream 57851 30630328 ~ 30632667 (+)
G1971104 NA other upstream 1212135 29474120 ~ 29478383 (+)
G1972252 NA other downstream 4431 30695233 ~ 30696314 (+)
G1973126 NA other downstream 466716 31157518 ~ 31157736 (+)
G1973193 NA other downstream 512813 31203615 ~ 31203991 (+)
G1973369 NA other downstream 696676 31387478 ~ 31387736 (+)
G1973635 NA other downstream 1027722 31718524 ~ 31718968 (+)

Expression


Co-expression Network